Bacillus amyloliquefaciens DSM 7

Names | Bacillus amyloliquefaciens DSM 7 |
---|---|
Accession numbers | NC_014551 |
Background | Bacillus amyloliquefaciens was originally described as potent producer of liquefying amylase and other industrially important extracellular enzymes. Type strain B. amyloliquefaciens DSM 7 (described by Fukumoto in 1943 as strain "F") was originally isolated from infested soil in Germany. It is also known as strain 10A6 in the Bacillus Genetic Stock Center culture collection. It does not colonize Arabidopsis roots. It is strictly aerobic and as expected liquefies starch. It can be distinguished from plant associated B.amyloliquefaciens based on a number of criteria, and 2 separate subspecies are proposed (plantarum and amyloliquefaciens). Comparison with a plant associated and plant-growth enhancing strain (FZB42, BACA2) has shown that this strain (DSM 7) harbors a significantly lower number of gene clusters involved in nonribosomal synthesis of secondary metabolites (adapted from PMID 21262282 and 20817842). (HAMAP: BACAS) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Bacillales |
Family: | Bacillaceae |
Genus: | Bacillus |
Species: | amyloliquefaciens |
Strain | NA |
Complete | Yes |
Sequencing centre | (04-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (24-NOV-2009) Blom J., Bielefeld University, Cebitec, Universitaetsstr. 25, 33615, GERMANY |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | 454-GS-FLX |
Isolation site | Soil |
Isolation country | Germany |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Soil |
Biotic relationship | NA |
Host name | NA |
Cell arrangement | NA |
Sporulation | Sporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis