Arthrobacter arilaitensis Re117

Names | Arthrobacter arilaitensis Re117 |
---|---|
Accession numbers | NC_014548, NC_014549, NC_014550 |
Background | Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) is an aerobic, non spore-forming, non-motile, Gram-negative bacterium isolated from the surfaces of smear-ripened cheese (French cheese "Pont l'Eveque") cultivated on brain heart infusion (BHI) agar and incubated at 28 degrees Celsius. Colonies on BHI agar are yellow, round, smooth, convex and 2 mm in diameter. A. arilaitensis grows between 10 and 30 degrees Celsius and tolerates up to 10% (w/v) NaCl. Gelatinase, beta-galactosidase, pyrazinamidase, pyrrolidonyl arylamidase, phosphatase and alpha-glucosidase are produced. It is able to use the following substrates as sole carbon sources: D-glucose, maltotriose, maltose, a-lactose, D-arabitol, glycerol, 5-keto-D-gluconate, D-gluconate, protocatechuate, 4-hydroxybenzoate, lactate, glycerate and tyrosine. (Adapted from PMID: 15653918). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Actinomycetales |
Family: | Micrococcaceae |
Genus: | Arthrobacter |
Species: | arilaitensis |
Strain | RE117 |
Complete | Yes |
Sequencing centre | (04-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (09-JUL-2010) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Reblochon cheese in France in 1998 |
Isolation country | France |
Number of replicons | 3 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Dairy isolate |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | Chlorophenol degrading |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
NCBI Genomes
NC_014548NC_014549
NC_014550