Vulcanisaeta distributa DSM 14429
Names | Vulcanisaeta distributa DSM 14429 |
---|---|
Accession numbers | NC_014537 |
Background | Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) is an anaerobic, hyperthermophilic archeon isolated from a hot spring in Ohwakudani, Kanagawa, Japan. The genus name derives from the Latin words "vulcanicus" meaning volcanic, and "saeta" meaning stiff hair, to indicate a rigid rod inhabiting volcanic hot springs. The cells are rigid, straight to slightly curved rods. Occasionally, they bend, branch out, or bear spherical bodies at the terminae, which have been termed as 'golf clubs'. Most cells are 0.4-0.6 um in width and 3-7 um long. Pili have been observed to rise terminally or laterally. V. distributa grows well even in the absence of a vitamin mixture or archaeal cell-extract solution in the medium. It is resistant to chloramphenicol, kanamycin, oleandomycin, streptomycin and vancomycin, but sensitive to erythromycin, novobiocin and rifampicin (all at 100 ug per ml). V. distributa needs acidic conditions and grows between pH between 3.5-5.6, and with a temperature between 70-92 degrees Celsius with an optimum at 90 degrees Celsius. Sulfur or thiosulfate is required as an electron acceptor. (Adapted from : http://standardsingenomics.org/index.php/sigen/article/view/sigs.1113067/372). (HAMAP: VULDI) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Crenarchaeota |
Class: | Thermoprotei |
Order: | Thermoproteales |
Family: | Thermoproteaceae |
Genus: | Vulcanisaeta |
Species: | distributa |
Strain | DSM 14429 |
Complete | Yes |
Sequencing centre | (16-JUL-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA (22-SEP-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Illumina, 454-GS-FLX |
Isolation site | "Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993" |
Isolation country | Japan |
Number of replicons | 1 |
Gram staining properties | NA |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | 85.0 |
Temperature range | Hyperthermophilic |
Habitat | Specialized |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | Heterotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Aminoacyl-tRNA biosynthesis