Maribacter sp. HTCC2170

Names | Maribacter sp. HTCC2170 |
---|---|
Accession numbers | NC_014472 |
Background | Maribacter sp. (strain HTCC2170 / KCCM 42371) is a facultative aerobic, chemoorganotrophic Gram-negative bacterium isolated from surface waters at a depth of 10 meters using dilution-to-extinction culturing in the coastal area of Newport, Oregon. Maribacter sp. is predicted to contain carotenoid biosynthesis genes, including a beta-carotene hydroxylase, but the genome has no predicted photosynthetic genes or light-utilizing systems. It contains genes for nitrate reductase, nitrous oxide reductase, and nitric oxide reductase for denitrification, as well as sulfate reductase genes. Maribacter sp. possesses a set of genes coding for enzymes required to degrade high-molecularweight compounds and moves by gliding motility. (Adapted from PMID: 21037013). (HAMAP: MARSH) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Bacteroidetes |
Class: | Flavobacteria |
Order: | Flavobacteriales |
Family: | Flavobacteriaceae |
Genus: | Maribacter |
Species: | HTCC2170 |
Strain | HTCC2170 |
Complete | Yes |
Sequencing centre | (04-AUG-2010) Division of Biology and Ocean Sciences, Inha University, College of Natural Sciences Inha University, (26-AUG-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | Coastal area of Newport Oregon at a depth of 10m |
Isolation country | USA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | Heterotroph |
Diseases | None |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis