Thermosediminibacter oceani DSM 16646

Thermosediminibacter_oceani
Names Thermosediminibacter oceani DSM 16646
Accession numbers NC_014377
Background Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) is an anaerobic, thermophilic, Gram-negative bacterium isolated from enrichment cultures obtained from deep sea sediments of Peru Margin collected during Leg 201 of the Ocean Drilling Program. The cells are straight to curved rods, 0.2-0.7 um in diameter and 1.5-16 um in length. Cells occur singly, in pairs, or in chains and tend to elongate and form aggregates. It grows with a range of pH from 6.3 to 9.3 with an optimum at 7.5 and a temperature range from 52 to 76 degrees Celsius with an optimum at 68 degrees Celsius. The salinity range for growth is from 0 to 6% (w/v), with an optimum at 1%. Cellobiose, fructose, galactose, glucose, maltose, mannose, raffinose, sucrose, trehalose, xylose, methanol, inositol, manitol, sorbitol, lactate, pyruvate serve as carbon and energy. Thiosulfate, elemental sulfur, and MnO2 can serve as electron acceptors. (Adapted from: http://standardsingenomics.org/index.php/sigen/article/view/sigs.1133078/374 and PMID: 15965715). (EBI Integr8)
Taxonomy
Kingdom:Bacteria
Phylum:Firmicutes
Class:Clostridia
Order:Thermoanaerobacterales
Family:Thermoanaerobacterales Family III. Incertae Sedis
Genus:Thermosediminibacter
Species:oceani
Strain DSM 16646
Complete Yes
Sequencing centre (02-AUG-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
(06-AUG-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Sequencing quality Level 6: Finished
Sequencing depth NA
Sequencing method Sanger, Illumina GAii, 454
Isolation site Deep sea sediments (252 m below sea level) of Peru Margin collected during Leg 201 of the Ocean Drilling Program
Isolation country Peru
Number of replicons 1
Gram staining properties Negative
Shape Bacilli
Mobility Yes
Flagellar presence Yes
Number of membranes 2
Oxygen requirements Anaerobic
Optimal temperature 68.0
Temperature range Thermophilic
Habitat Specialized
Biotic relationship Free living
Host name NA
Cell arrangement NA
Sporulation NA
Metabolism NA
Energy source NA
Diseases NA
Pathogenicity No