Olsenella uli DSM 7084
Names | Olsenella uli DSM 7084 |
---|---|
Accession numbers | NC_014363 |
Background | Olsenella species, particularly O.uli, are common members of the microbiota associated with primary endodontic infection, sometimes from blood of humans with local oral or gastrointestinal infections, and are also found in the bovine rumen. O.uli has been found to predominate over other Gram-positive rods in root canal samples taken after chemomechanical preparation and intracanal medication, suggesting that this species can resist intracanal disinfection measures and thus may be involved in persistent dental infections.Strain VPI D76D-27CT was isolated from either human gingival crevices or periodontal pockets. The bacteria are nonmotile, Gram-positive rods that occur singly, in pairs, and in short chains; the central part of the cell may swell particularly when grown on solid medium. This strain is microaerotolerant to anaerobic and grows optimally at 37 degrees Celsius. It does not grow on 6.5% w/v NaCl, and is able to ferment glucose, glycogen, trehalose and starch. Lactic acid is a major product of the strain VPI D76D-27CT, which is suspected to be important in inflammatory processes of endodontic infections (adapted from http://standardsingenomics.org/index.php/sigen/article/view/sigs.1082860/sigs.1082860_pdf and PMID 20435744). (HAMAP: OLSUV) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Coriobacteriales |
Family: | Coriobacteriaceae |
Genus: | Olsenella |
Species: | uli |
Strain | DSM 7084 |
Complete | Yes |
Sequencing centre | (02-AUG-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (19-JUL-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Illumina GAii, 454-GS-FLX-Titanium |
Isolation site | plaque from human gingival crevices |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | 37.0 |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Chains, Pairs, Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | Chemoorganotroph |
Diseases | NA |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis