Waddlia chondrophila WSU 86-1044
Names | Waddlia chondrophila WSU 86-1044 |
---|---|
Accession numbers | NC_014225, NC_014226 |
Background | This obligatory intracellular bacteria is suspected to be an agent of miscarriage in humans and ruminants. Strain WSU 86-1044 was isolated in 1986 at the Washington Animal Disease Diagnostic Laboratory (hence the genus name) from tissues of a first-trimester aborted bovine foetus; it grows in macrophages as well as in Acanthamoeba castellanii. Unlike other Chlamydia sequenced to date 5% of the genome encodes repetitive sequences; other Chlamydia have almost no repetitive DNA. It encodes a number of virulence factors specific for resistance to host or environmental stresses including a putative carbonate permease, heavy metal exporters and multidrug efflux pumps. It is less metabolically dependent on its host than other Chlamydiae, as it encodes the capacity to synthesize some nucleotides, amino acids, lipids and other cofactors (adapted from PMID 20531937). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Chlamydiae |
Class: | Chlamydiae |
Order: | Chlamydiales |
Family: | Waddliaceae |
Genus: | Waddlia |
Species: | chondrophila |
Strain | WSU 86-1044 |
Complete | Yes |
Sequencing centre | (07-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (09-FEB-2010) Institute of Microbiology, University Hospital Center and University of Lausanne, Bugnon 48, Lausanne VD |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Solexa, Illumina GAii, 454-GS-FLX |
Isolation site | Pooled liver/lung homogenate from the aborted fetus of a 19-month-old primigravid Holstein cow during month 3 of gestation |
Isolation country | NA |
Number of replicons | 2 |
Gram staining properties | Negative |
Shape | NA |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | NA |
Optimal temperature | NA |
Temperature range | NA |
Habitat | HostAssociated |
Biotic relationship | NA |
Host name | Cow |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis