Truepera radiovictrix DSM 17093
Names | Truepera radiovictrix DSM 17093 |
---|---|
Accession numbers | NC_014221 |
Background | Truepera radiovictrix was isolated from a hot spring within a geothermal area located along the dry bed of a stream known as Ribeira Quente, on the Island of Sao Miguel in the Azores, Portugal. The hot springs in this area discharge neutral to slightly alkaline water that may reach the boiling point. Strain RQ-24T was isolated from a runoff with a temperature of 52 degrees Celsius and a pH of 7.0. The red-pigmented bacteria formed non-motile spherical cells about 1.25 to 2.0 um in diameter, most of which formed pairs or tetrads. The cytoplasm has a fibrillar nucleoid and tubular structures of unknown nature. The optimum pH of strain RQ-24T was between 7.5 and 9.5, but growth continues until pH 11.2. The optimal temperature is about 50 degrees Celsius, and maximal growth occurs in 1% NaCl, although it continues to grow in up to 6% NaCl. It is extremely resistant to ionizing radiation; 60% of the cells survive 5.0 kGy. It is aerobic, the major respiratory quinone is menaquinone 8 and no peptidoglycan was detected, although the cell wall is quite elaborate (adapted from PMID 15927420). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Deinococcus-Thermus |
Class: | Deinococci |
Order: | Deinococcales |
Family: | Trueperaceae |
Genus: | Truepera |
Species: | radiovictrix |
Strain | DSM 17093 |
Complete | Yes |
Sequencing centre | (02-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (21-MAY-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Illumina GAii, 454-GS-FLX-Titanium |
Isolation site | "Water sample from a hot spring runoffs on the Island of Sao Miguel in the Azores, Portugal" |
Isolation country | Portugal |
Number of replicons | 1 |
Gram staining properties | NA |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Obligate aerobic |
Optimal temperature | NA |
Temperature range | Thermophilic |
Habitat | Fresh water, Hot spring |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | Chemoorganotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis