Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1

Names | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 |
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Accession numbers | NC_014215 |
Background | All members of the genus Propionibacterium produce propionic acid as a major metabolic end-product; however they are divided into 2 groups, a cutaneous group (which can cause acne) and a dairy group used in cheese production. P.freudenreichii has been long used in Emmental-type cheese ripening, where it drives fermentation of lactate into propionate, acetate and CO(2), resulting in holes. It also plays a role in flavor development of these cheeses. P.freudenreichii are also used in the production of vitamin B12, and strains that overproduce this vitamin have been developed. Additionally as a producer of bifidogenic compounds it stimulates growth of bifidobacteria, which are beneficial to humans. The genome sequence of strain CIRM-BIA1 (other synonyms DSM 4902 / NCIB 8099 / VPI 0405) has 22 insertion sequences, 72 different transposases and a few prophages. No pathogenicity factors from the related acne-causing P.acnes were detected in P.freundenreichii. It is able to synthesize all amino acids and nucleotides, and all vitamins except pantothenate and biotin; while the thiamine pathway seems complete this bacteria requires thiamine for growth. This bacteria grows only poorly in milk, and grows in cheese mainly due to its ability to ferment lactic acid anaerobically. It can survive the cheese cooking step (heating to 54 degrees Celsius for about 30 minutes) in a strain dependent fashion (adapted from PMID 20668525). (HAMAP: PROFC) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Actinomycetales |
Family: | Propionibacteriaceae |
Genus: | Propionibacterium |
Species: | freudenreichii |
Strain | CIRM-BIA1 |
Complete | Yes |
Sequencing centre | (02-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (06-APR-2010) Loux V., I.N.R.A, Unite MIG, Domaine de Vilvert, 78352 Jouy en Josas Cedex, FRANCE |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | NA |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis