Haloferax volcanii DS2
Names | Haloferax volcanii DS2 |
---|---|
Accession numbers | NC_013964, NC_013965, NC_013966, NC_013967, NC_013968 |
Background | Haloferax volcanii (strain ATCC 29605 / DSM 3757 / IFO 14742 / NCIMB 2012 / DS2) is a moderate halophilic archaeon isolated from bottom sediment from the Dead Sea. H.volcanii possesses the properties of the halobacteria, but differs from the known species in two important respects; the cells are disc shaped and often cupped when grown under optimum conditions, and the optimum requirements for sodium chloride is in the range 1.7-2.5 molar which is about half of that generally reported for the halobacteria. The optimum sodium chloride concentration for growth is close to that found in the Dead Sea and the tolerance for magnesium chloride is very high. (adapted from PMID: 1190944 and 20333302). (HAMAP: HALVD) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Euryarchaeota |
Class: | Halobacteria |
Order: | Halobacteriales |
Family: | Halobacteriaceae |
Genus: | Haloferax |
Species: | volcanii |
Strain | DS2 |
Complete | Yes |
Sequencing centre | (04-FEB-2010) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA (26-MAR-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | shore mud, Dead Sea |
Isolation country | NA |
Number of replicons | 5 |
Gram staining properties | NA |
Shape | Bacilli |
Mobility | No |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | Chemoorganotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Methane metabolism
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Methane metabolism
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis