Natrialba magadii ATCC 43099

Names | Natrialba magadii ATCC 43099 |
---|---|
Accession numbers | NC_013922, NC_013923, NC_013924, NC_013925 |
Background | Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) is an aerobic, haloalkaliphilic (thriving in high salt concentrations and high pH) extremophile archaeon isolated from Lake Magadi in Kenya. It thrives in alkaline hypersaline conditions (pH 9.5, 3.5 M NaCl) and encodes enzymes that are not only salt tolerant but also often tolerant of high pH, high temperatures, and the presence of solvents. (Adapted from:http://genome.jgi-psf.org/natma/natma.home.html). (HAMAP: NATMM) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Euryarchaeota |
Class: | Halobacteria |
Order: | Halobacteriales |
Family: | Halobacteriaceae |
Genus: | Natrialba |
Species: | magadii |
Strain | ATCC 43099 |
Complete | Yes |
Sequencing centre | (12-FEB-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA (24-FEB-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Lake Magadi in Kenya |
Isolation country | Kenya |
Number of replicons | 4 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Specialized |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis