Methanobrevibacter ruminantium M1

Names | Methanobrevibacter ruminantium M1 |
---|---|
Accession numbers | NC_013790 |
Background | Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) is a dominant ruminant, acetate-utilizer, methanogenic archaeon isolated from a bovine rumen. It can grow with H2 plus CO2 and formate. It can be used as an indicator of fecal pollution from domesticated ruminants in environmental water samples. (Adapted from PMID: 20126622). (HAMAP: METRM) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Euryarchaeota |
Class: | Methanobacteria |
Order: | Methanobacteriales |
Family: | Methanobacteriaceae |
Genus: | Methanobrevibacter |
Species: | ruminantium |
Strain | M1 |
Complete | Yes |
Sequencing centre | (05-FEB-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (31-AUG-2009) Food, Metabolism & Microbiology, AgResearch Ltd., Grasslands Research Centre Tennent Drive, Private Bag 11008, |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | 454, WGS |
Isolation site | Bovine rumen |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | NA |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Bovine |
Cell arrangement | Chains, Pairs |
Sporulation | NA |
Metabolism | Methanogen |
Energy source | Lithotroph |
Diseases | NA |
Pathogenicity | No |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
C5-Branched dibasic acid metabolism
Methane metabolism
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Porphyrin and chlorophyll metabolism
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
C5-Branched dibasic acid metabolism
Methane metabolism
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Porphyrin and chlorophyll metabolism
Aminoacyl-tRNA biosynthesis