Haloterrigena turkmenica DSM 5511

Names | Haloterrigena turkmenica DSM 5511 |
---|---|
Accession numbers | NC_013743, NC_013744, NC_013745, NC_013746, NC_013747, NC_013748, NC_013749 |
Background | Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) is a chemoorganotrophic, carotenoid-containing, extreme halophilic Gram-negative bacterium isolated from a sulfate saline soil in Turkmenistan. H. turkmenica cells occur mostly as single cells, rarely in pairs or tetrads. It is described as ovoid to coccoid, 1.5-2 um in diameter, but can also be rod-shaped. It has neither spores, nor flagella, nor lipid. Colonies are pigmented red or light pink due of the presence of C5O-carotenoids. It requires at least 2 M NaCl, and the optimal temperature growth is 51 degrees Celsius. (Adapted from: PMID 21304683). (HAMAP: HALTV) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Euryarchaeota |
Class: | Halobacteria |
Order: | Halobacteriales |
Family: | Halobacteriaceae |
Genus: | Haloterrigena |
Species: | turkmenica |
Strain | DSM 5511 |
Complete | Yes |
Sequencing centre | (11-JAN-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA (20-JAN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, Illumina, 454 |
Isolation site | Salt soil crust in Ashkhabad, Turkmenistan |
Isolation country | Turkmenistan |
Number of replicons | 7 |
Gram staining properties | Negative |
Shape | Cocci |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Specialized |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis