Rothia mucilaginosa DY-18
Names | Rothia mucilaginosa DY-18 |
---|---|
Accession numbers | NC_013715 |
Background | Rothia mucilaginosa (strain ATCC DY-18) is a cocci-shaped Gram-positive bacterium that inhabits the oral cavity and upper respiratory tract. The bacterium is considered as an opportunistic pathogen and has been associated with endocarditis, meningitis, and peritonitis. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Actinomycetales |
Family: | Micrococcaceae |
Genus: | Rothia |
Species: | mucilaginosa |
Strain | DY-18 |
Complete | Yes |
Sequencing centre | (06-JAN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (10-JUL-2009) Contact:Kazuyoshi Yamane Osaka Dental University, Bacteriology 8-1, Kuzuhahanazono-cho, Hirakata, Osaka |
Sequencing quality | Level 2: High-Quality Draft |
Sequencing depth | NA |
Sequencing method | 454 |
Isolation site | Human oral flora |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Cocci |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | NA |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis