Streptosporangium roseum DSM 43021
| Names | Streptosporangium roseum DSM 43021 |
|---|---|
| Accession numbers | NC_013595, NC_013596 |
| Background | Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) is an aerobic Gram-positive bacterium isolated from vegetable garden soil in 1955. It produces aerial mycelium and the color of the substrate mycelium is red-brown to yellow-brown. S. roseum utilizes glucose, arabinose, sucrose, xylose, fructose, and raffinose, but not inositol, mannose, rhamnose, or cellulose. It produces a secondary metabolite, the antibiotic angucycline WS 79089B, which is an inhibitor of the endothelin-converting enzyme. In contrast to S. carneum, S. roseum does not produce an antibiotic against Staphylococcus aureus. (Adaptated from: http://standardsingenomics.org/index.php/sigen/article/view/sigs.631049/139). (EBI Integr8) |
| Taxonomy | |
| Kingdom: | Bacteria |
| Phylum: | Actinobacteria |
| Class: | Actinobacteria |
| Order: | Actinomycetales |
| Family: | Streptosporangiaceae |
| Genus: | Streptosporangium |
| Species: | roseum |
| Strain | DSM 43021 |
| Complete | Yes |
| Sequencing centre | (10-DEC-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (10-NOV-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA |
| Sequencing quality | Level 6: Finished |
| Sequencing depth | NA |
| Sequencing method | Sanger, 454-GS-FLX |
| Isolation site | Vegetable garden soil |
| Isolation country | USA |
| Number of replicons | 2 |
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Oxygen requirements | Aerobic |
| Optimal temperature | NA |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host name | NA |
| Cell arrangement | NA |
| Sporulation | Sporulating |
| Metabolism | NA |
| Energy source | NA |
| Diseases | NA |
| Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Tryptophan metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
beta-Alanine metabolism
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Glyoxylate and dicarboxylate metabolism
Nitrotoluene degradation
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Biosynthesis of type II polyketide backbone
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Tryptophan metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
beta-Alanine metabolism
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Glyoxylate and dicarboxylate metabolism
Nitrotoluene degradation
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Biosynthesis of type II polyketide backbone