Thermobaculum terrenum ATCC BAA-798
Names | Thermobaculum terrenum ATCC BAA-798 |
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Accession numbers | NC_013525, NC_013526 |
Background | Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) is an obligate aerobic, non-spore-forming, hyperthermophilic Gram-positive bacterium isolated from an extreme thermal soil (pH of 3.9 and temperatures ranging from 65 to 92 degrees Celsius) in Yellowstone National Park, Wyoming, USA. It forms pink-colored colonies. This organism is able to grow heterotrophically on various carbon compounds and at temperatures of up to 92 degrees Celsius. Growth occurs in a pH range of 6-8, the optimum being pH 7. It uses only oxygen as an electron acceptor, and its growth is not affected by light. T. terrenum contains a novel fatty acid profile, has cell wall muramic acid content similar to that of Bacillus, and fails to display a lipopolysaccharide profile in SDS-polyacrylamide gels (indicative of a Gram-negative cell wall structure). Ultrastructure examinations with transmission electron microscopy shows a thick cell wall (approximately 34 nm wide) external to a cytoplasmic membrane. Phylogenetic analysis of the 16S rRNA gene sequence placed this organism in a clade composed entirely of environmental clones most closely related to the phyla Chloroflexi and Thermomicrobia. Perhaps the most intriguing characteristic of T.terrenum that sets it apart from Chloroflexi and its relatives is the cell wall structure, which appears to resemble that of a typical Gram-positive bacterium. The Chloroflexi all share the common trait of lacking an outer membrane; however, all members also have a very thin cell wall and stain Gram-negative. Therefore, T. terrenum likely represents an extreme example within a continuum of cell wall structures observed in the Chloroflexi-Thermomicrobia cluster. (EBI Integr8) |
Taxonomy | |
Kingdom: | NA |
Phylum: | NA |
Class: | NA |
Order: | NA |
Family: | NA |
Genus: | NA |
Species: | NA |
Strain | ATCC BAA-798 |
Complete | Yes |
Sequencing centre | (12-NOV-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA (23-NOV-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454 |
Isolation site | "Soil in Yellowstone National Park, Wyoming, USA" |
Isolation country | USA |
Number of replicons | 2 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | 67.0 |
Temperature range | Hyperthermophilic |
Habitat | Specialized |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Pairs, Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | Heterotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis