BacMap

Definition	Ruegeria sp. TM1040, complete genome.
Accession	NC_008044
Length	3,200,938

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The map label for this gene is rbsA

Identifier: 99081029

GI number: 99081029

Start: 1277641

End: 1279176

Strand: Direct

Name: rbsA

Synonym: TM1040_1188

Alternate gene names: 99081029

Gene position: 1277641-1279176 (Clockwise)

Preceding gene: 99081028

Following gene: 99081030

Centisome position: 39.91

GC content: 58.2

Gene sequence:

>1536_bases
ATGACAGGCGACGTGATCCTGCAAATTTCGAACCTCACGAAGTCCTTTGGGCCGGTAAAGGCGCTAAAGGGCGTGGATTT
CGAACTCCGCCGTGGCGAGATCCACGCAATCGCCGGAGAGAACGGCGCCGGGAAGTCCACGTTGATGAACATCATCGACG
GTATTTTGCAGCCCGACAGCGGTGAAATCCGGCTCGATGGCACCCCTGTCGAAATTCCGTCTCCGGCAGCGGCGCAAAAG
ATGGGGATCGGCTTTGTGCATCAGGAGATCGCACTCTGTCCGGATGTCTCGGTCGCTGAAAACATCTTTATGGCTGCGAC
CAATTCAAGCCGGTCTTTTCTGATGGATTACAAAGGGATCGAAGCCAAAGCGCGCGAAGTTTTTGCGCAGTTGTCGAGCA
TTGATCCCTCTGTGCTCGTCCGGGACCTTTCGATTTCGAACCAGCAGCTTGTGGAGATCGCCAAGGCGCTGACGCTGGAC
TGCCGGGTGTTGATCCTGGATGAGCCAACGGCAGCGCTGACCGAGGCGGAGGCGCAGGTGCTGTTCAAGATCATGCGGCG
GCTGGCGGATCAGGGGATTTCGTTGATTTATATCTCGCATCGTATGGTCGAGATCTTTGACAATTGCGACCGGGTCTCGG
TGTTTCGCGATGGCCGCTATGTGACGACACAGGATGTCGCCAAAATCACGCCTGCAGATGTGGTCCGGGCCATGGTGGGG
CGCGAAATTGGCGATCTCTATCCCGAAAAACAACGTCCCGAGGCCTGCAGCACGACCGAGGTCCTCCGGGTTGAAAACCT
TTGTGAGGCCGAGCGGTTTCACGATGTGTCCTTTTCGCTGCATAAGGGCGAGATCCTGGGCTTTGCCGGGTTGATCGGTG
CAGGGCGCAGCGAGATCGCCAAAGGGGTCTGCGCGCTTGAAGGTCAGGTGACTGGCAGGCTCTGGCTCAATGGAGAGCCG
CTGGCGCTGCGCGACTATCAGGACAGCATTGATGCGGGGATTGTGTATCTCTCCGAGGATCGCAAAGGCGACGGCGTGTT
TCTGGATATGTCCATCGCCAGCAATGTTTCGGCGCTGAAGGTCGAACAGGTGGCCAGCGCCCTCGGGTTGATCCAGCCTG
GCAGGGAAATAGAGCAGGCGGACCGACTTGGGCGCAAGCTCAACCTCAAATGCGGCACGCTGCAGGATCCGGTTTCGTCG
CTTTCGGGCGGCAATCAACAAAAGGTAGCACTGGCCAAGATGCTCTCGGTCAACCCGCGACTGATCTTTCTGGATGAGCC
GACGCGTGGCGTTGACGTTGGCGCAAAGGCCGAAATCTACCGCATCCTGCGGGATTTGGCCGAGGAGGGCGCAGGCATTG
TGGTTATTTCATCCGAGCTGCCAGAACTGATCGGTCTGTGTGATCGCGTGCTGGTGATCCACGAAGGGTGTCTGAGCGGT
GAAGTGAGTGGCCCGGACATGACAGAAGAAAACATCATGCACCTTGCCTCGGGCACTCAGCAAGGCACGGGTGCAGCGTC
GGTTGCGGCGCAATGA

Upstream 100 bases:

>100_bases
CGGTCGCGATCCCAGCTGATCCGGACATCGCGGATGTGGCTGCCCGGTGAGGGGCCGGGCAGCCCACAGATCAATTTTCC
AGAAGAGACGGGCGAGCGAT

Downstream 100 bases:

>100_bases
AGGGGGAGACAATGGAGCAATCTGTGAACATCGCACTGGCCGAAACATCGAGGGGAAAATCGCTTTTGGGGCGGCTCTTG
CGGATGCGCGAAACGGGCCT

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTGDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDSGEIRLDGTPVEIPSPAAAQK
MGIGFVHQEIALCPDVSVAENIFMAATNSSRSFLMDYKGIEAKAREVFAQLSSIDPSVLVRDLSISNQQLVEIAKALTLD
CRVLILDEPTAALTEAEAQVLFKIMRRLADQGISLIYISHRMVEIFDNCDRVSVFRDGRYVTTQDVAKITPADVVRAMVG
REIGDLYPEKQRPEACSTTEVLRVENLCEAERFHDVSFSLHKGEILGFAGLIGAGRSEIAKGVCALEGQVTGRLWLNGEP
LALRDYQDSIDAGIVYLSEDRKGDGVFLDMSIASNVSALKVEQVASALGLIQPGREIEQADRLGRKLNLKCGTLQDPVSS
LSGGNQQKVALAKMLSVNPRLIFLDEPTRGVDVGAKAEIYRILRDLAEEGAGIVVISSELPELIGLCDRVLVIHEGCLSG
EVSGPDMTEENIMHLASGTQQGTGAASVAAQ

Sequences:

>Translated_511_residues
MTGDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDSGEIRLDGTPVEIPSPAAAQK
MGIGFVHQEIALCPDVSVAENIFMAATNSSRSFLMDYKGIEAKAREVFAQLSSIDPSVLVRDLSISNQQLVEIAKALTLD
CRVLILDEPTAALTEAEAQVLFKIMRRLADQGISLIYISHRMVEIFDNCDRVSVFRDGRYVTTQDVAKITPADVVRAMVG
REIGDLYPEKQRPEACSTTEVLRVENLCEAERFHDVSFSLHKGEILGFAGLIGAGRSEIAKGVCALEGQVTGRLWLNGEP
LALRDYQDSIDAGIVYLSEDRKGDGVFLDMSIASNVSALKVEQVASALGLIQPGREIEQADRLGRKLNLKCGTLQDPVSS
LSGGNQQKVALAKMLSVNPRLIFLDEPTRGVDVGAKAEIYRILRDLAEEGAGIVVISSELPELIGLCDRVLVIHEGCLSG
EVSGPDMTEENIMHLASGTQQGTGAASVAAQ
>Mature_510_residues
TGDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDSGEIRLDGTPVEIPSPAAAQKM
GIGFVHQEIALCPDVSVAENIFMAATNSSRSFLMDYKGIEAKAREVFAQLSSIDPSVLVRDLSISNQQLVEIAKALTLDC
RVLILDEPTAALTEAEAQVLFKIMRRLADQGISLIYISHRMVEIFDNCDRVSVFRDGRYVTTQDVAKITPADVVRAMVGR
EIGDLYPEKQRPEACSTTEVLRVENLCEAERFHDVSFSLHKGEILGFAGLIGAGRSEIAKGVCALEGQVTGRLWLNGEPL
ALRDYQDSIDAGIVYLSEDRKGDGVFLDMSIASNVSALKVEQVASALGLIQPGREIEQADRLGRKLNLKCGTLQDPVSSL
SGGNQQKVALAKMLSVNPRLIFLDEPTRGVDVGAKAEIYRILRDLAEEGAGIVVISSELPELIGLCDRVLVIHEGCLSGE
VSGPDMTEENIMHLASGTQQGTGAASVAAQ

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system

COG id: COG1129

COG function: function code G; ABC-type sugar transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains

Homologues:

Organism=Homo sapiens, GI9961252, Length=207, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4505771, Length=207, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI9961250, Length=207, Percent_Identity=34.7826086956522, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI42741659, Length=207, Percent_Identity=31.4009661835749, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI150417984, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI25914749, Length=223, Percent_Identity=31.390134529148, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI27436953, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI27262624, Length=229, Percent_Identity=27.0742358078603, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI27262626, Length=229, Percent_Identity=27.0742358078603, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=28.8659793814433, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI171184400, Length=204, Percent_Identity=31.3725490196078, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI21536376, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=28.8659793814433, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI156105685, Length=223, Percent_Identity=27.8026905829596, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1790190, Length=496, Percent_Identity=42.1370967741936, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1789991, Length=514, Percent_Identity=40.272373540856, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1788472, Length=500, Percent_Identity=38.2, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1790525, Length=501, Percent_Identity=39.1217564870259, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI48995001, Length=494, Percent_Identity=37.4493927125506, Blast_Score=325, Evalue=6e-90,
Organism=Escherichia coli, GI1788210, Length=496, Percent_Identity=36.8951612903226, Blast_Score=324, Evalue=7e-90,
Organism=Escherichia coli, GI1787792, Length=500, Percent_Identity=38, Blast_Score=316, Evalue=2e-87,
Organism=Escherichia coli, GI1788897, Length=484, Percent_Identity=36.7768595041322, Blast_Score=304, Evalue=7e-84,
Organism=Escherichia coli, GI145693107, Length=562, Percent_Identity=27.4021352313167, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788506, Length=522, Percent_Identity=25.4789272030651, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=30.6382978723404, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=31.1926605504587, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787712, Length=224, Percent_Identity=29.4642857142857, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787029, Length=205, Percent_Identity=28.2926829268293, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=30.6034482758621, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI48994943, Length=235, Percent_Identity=28.5106382978723, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI87081782, Length=233, Percent_Identity=28.3261802575107, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=30.4545454545455, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788450, Length=254, Percent_Identity=29.5275590551181, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787105, Length=229, Percent_Identity=30.5676855895196, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=28.125, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786703, Length=233, Percent_Identity=31.3304721030043, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=28.82096069869, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081709, Length=256, Percent_Identity=26.953125, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787758, Length=229, Percent_Identity=31.0043668122271, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=28.448275862069, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=29.2792792792793, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787547, Length=259, Percent_Identity=27.7992277992278, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786872, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI48994997, Length=226, Percent_Identity=27.8761061946903, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082268, Length=235, Percent_Identity=23.8297872340426, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=28.5067873303167, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1790739, Length=253, Percent_Identity=28.0632411067194, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI48994883, Length=222, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786398, Length=283, Percent_Identity=25.4416961130742, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1789891, Length=232, Percent_Identity=28.8793103448276, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=27.3913043478261, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=31.25, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787500, Length=226, Percent_Identity=26.9911504424779, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=27.8301886792453, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786253, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=30.2884615384615, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=26.5822784810127, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789032, Length=282, Percent_Identity=26.241134751773, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=208, Percent_Identity=30.2884615384615, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787143, Length=225, Percent_Identity=30.2222222222222, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788644, Length=212, Percent_Identity=27.8301886792453, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87082267, Length=220, Percent_Identity=29.5454545454545, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI2367384, Length=175, Percent_Identity=32.5714285714286, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786654, Length=215, Percent_Identity=26.046511627907, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787164, Length=219, Percent_Identity=26.9406392694064, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=27.4336283185841, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=208, Percent_Identity=31.25, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=204, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=208, Percent_Identity=30.2884615384615, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17569143, Length=209, Percent_Identity=33.4928229665072, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=208, Percent_Identity=29.3269230769231, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=221, Percent_Identity=24.8868778280543, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=216, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=201, Percent_Identity=31.8407960199005, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=204, Percent_Identity=28.4313725490196, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=210, Percent_Identity=29.0476190476191, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71996550, Length=235, Percent_Identity=27.2340425531915, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=222, Percent_Identity=27.4774774774775, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=211, Percent_Identity=31.2796208530806, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=230, Percent_Identity=29.1304347826087, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6324585, Length=213, Percent_Identity=27.6995305164319, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI221512771, Length=218, Percent_Identity=28.4403669724771, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=28.0542986425339, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19920532, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24580930, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641565, Length=207, Percent_Identity=31.4009661835749, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643674, Length=218, Percent_Identity=27.0642201834862, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI17136662, Length=208, Percent_Identity=29.8076923076923, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007184, Length=207, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221500365, Length=207, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650853, Length=211, Percent_Identity=27.9620853080569, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650855, Length=211, Percent_Identity=27.9620853080569, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI281362751, Length=210, Percent_Identity=28.0952380952381, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363262, Length=204, Percent_Identity=29.9019607843137, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=204, Percent_Identity=29.9019607843137, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581191, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581189, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581193, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581195, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85725262, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBSA_SILST (Q1GHE5)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_613183.1
- ProteinModelPortal:   Q1GHE5
- SMR:   Q1GHE5
- STRING:   Q1GHE5
- GeneID:   4077797
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_1188
- NMPDR:   fig|292414.1.peg.3679
- eggNOG:   COG1129
- HOGENOM:   HBG758042
- OMA:   TEENIMQ
- PhylomeDB:   Q1GHE5
- ProtClustDB:   CLSK881771
- BioCyc:   SSP292414:TM1040_1188-MONOMER
- HAMAP:   MF_01716
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: =3.6.3.17

Molecular weight: Translated: 54982; Mature: 54851

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51254 RBSA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDS
CCCCEEEEEEHHHHHCCCHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCC
GEIRLDGTPVEIPSPAAAQKMGIGFVHQEIALCPDVSVAENIFMAATNSSRSFLMDYKGI
CCEEECCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHCCEEEEECCCCCEEEEECCCC
EAKAREVFAQLSSIDPSVLVRDLSISNQQLVEIAKALTLDCRVLILDEPTAALTEAEAQV
HHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
LFKIMRRLADQGISLIYISHRMVEIFDNCDRVSVFRDGRYVTTQDVAKITPADVVRAMVG
HHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCEEEHHHHHHCCHHHHHHHHHH
REIGDLYPEKQRPEACSTTEVLRVENLCEAERFHDVSFSLHKGEILGFAGLIGAGRSEIA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHCCCHHHHH
KGVCALEGQVTGRLWLNGEPLALRDYQDSIDAGIVYLSEDRKGDGVFLDMSIASNVSALK
CCHHEECCCEEEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHHH
VEQVASALGLIQPGREIEQADRLGRKLNLKCGTLQDPVSSLSGGNQQKVALAKMLSVNPR
HHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCE
LIFLDEPTRGVDVGAKAEIYRILRDLAEEGAGIVVISSELPELIGLCDRVLVIHEGCLSG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCC
EVSGPDMTEENIMHLASGTQQGTGAASVAAQ
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDS
CCCEEEEEEHHHHHCCCHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCC
GEIRLDGTPVEIPSPAAAQKMGIGFVHQEIALCPDVSVAENIFMAATNSSRSFLMDYKGI
CCEEECCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCHHHCCEEEEECCCCCEEEEECCCC
EAKAREVFAQLSSIDPSVLVRDLSISNQQLVEIAKALTLDCRVLILDEPTAALTEAEAQV
HHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
LFKIMRRLADQGISLIYISHRMVEIFDNCDRVSVFRDGRYVTTQDVAKITPADVVRAMVG
HHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCEEEHHHHHHCCHHHHHHHHHH
REIGDLYPEKQRPEACSTTEVLRVENLCEAERFHDVSFSLHKGEILGFAGLIGAGRSEIA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHCCCHHHHH
KGVCALEGQVTGRLWLNGEPLALRDYQDSIDAGIVYLSEDRKGDGVFLDMSIASNVSALK
CCHHEECCCEEEEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHHH
VEQVASALGLIQPGREIEQADRLGRKLNLKCGTLQDPVSSLSGGNQQKVALAKMLSVNPR
HHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCE
LIFLDEPTRGVDVGAKAEIYRILRDLAEEGAGIVVISSELPELIGLCDRVLVIHEGCLSG
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCC
EVSGPDMTEENIMHLASGTQQGTGAASVAAQ
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA