Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080914

Identifier: 99080914

GI number: 99080914

Start: 1149988

End: 1150299

Strand: Direct

Name: 99080914

Synonym: TM1040_1073

Alternate gene names: NA

Gene position: 1149988-1150299 (Clockwise)

Preceding gene: 99080913

Following gene: 99080916

Centisome position: 35.93

GC content: 72.44

Gene sequence:

>312_bases
ATGAGGCCGGTGCCTTGTGCGACGGACATTCTGCGCCCGGTGCTCTGGGAGGACATCCGAAGCCTTGCGCGCGCGCTTCT
GGCGCATCCGGCGCAGCGCCGGGGCGCGCTCTGCCAGGAGATCCTGAAGGGGGCGGCGCGGGCACGGGTTTACGCCGCCG
CGACCGGGCGCTGCCATCCGCGCTGGGGCGATGGATCGGTGGATCGGGCGGCGCGCCGGTTTCCGCTGGCGCCGGAGCCG
TTTCCCGGCGCGCCGGACTATGCGGGATGCCTGCAAATGGCGCTTGCGGCCGCTCAGCACCGCAAACCCTAA

Upstream 100 bases:

>100_bases
CAGAGCAGGCCAGTGACGGCGTGCAGGCCGGGGATGTGGTGGAGGTGGCGCAGATCTCGGCCCGGTTTGGCGCCGGGGCG
GTGGCGCAGTGGGCGCTGGC

Downstream 100 bases:

>100_bases
GCGATAACCTGGAAACGATCGGACCACAAAAAACGCCCCGGCGCGATGCGACCGGGGCGTTTCAAATCTCGATCCGTCAA
AAGAGGCGGGCAGCGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MRPVPCATDILRPVLWEDIRSLARALLAHPAQRRGALCQEILKGAARARVYAAATGRCHPRWGDGSVDRAARRFPLAPEP
FPGAPDYAGCLQMALAAAQHRKP

Sequences:

>Translated_103_residues
MRPVPCATDILRPVLWEDIRSLARALLAHPAQRRGALCQEILKGAARARVYAAATGRCHPRWGDGSVDRAARRFPLAPEP
FPGAPDYAGCLQMALAAAQHRKP
>Mature_103_residues
MRPVPCATDILRPVLWEDIRSLARALLAHPAQRRGALCQEILKGAARARVYAAATGRCHPRWGDGSVDRAARRFPLAPEP
FPGAPDYAGCLQMALAAAQHRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11220; Mature: 11220

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVPCATDILRPVLWEDIRSLARALLAHPAQRRGALCQEILKGAARARVYAAATGRCHP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RWGDGSVDRAARRFPLAPEPFPGAPDYAGCLQMALAAAQHRKP
CCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPVPCATDILRPVLWEDIRSLARALLAHPAQRRGALCQEILKGAARARVYAAATGRCHP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RWGDGSVDRAARRFPLAPEPFPGAPDYAGCLQMALAAAQHRKP
CCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA