Click here to switch to the map view.

The map label for this gene is 99080909

Identifier: 99080909

GI number: 99080909

Start: 1143441

End: 1144100

Strand: Direct

Name: 99080909

Synonym: TM1040_1068

Alternate gene names: NA

Gene position: 1143441-1144100 (Clockwise)

Preceding gene: 99080908

Following gene: 99080910

Centisome position: 35.72

GC content: 67.42

Gene sequence:

>660_bases
ATGGCAAACACAACAGATTCCGACTTTGAATCCCAGACGGGGCCGCTGGAGGACAGCCTTGGCGATGCGGCCGGAATGGC
GGCGCAGTTCACCGCCGAGATGGACCGGGTGCGCGCGGCCTTTGCCGCCACGCAGGCGGATGCGGCGGATTTTGAAACCG
GCCTCAGCCGGGGGCTGCGGCGCGCGATGAAGGATCTGGTGGTGGATGGCGACAGCCTGAGCGATGCGCTCACCGGCCTC
GCCAAGACGATGATCGACACCACCTTCAACTCCGCCATGCGCCCGGTGACGGATCATCTCGGCGGGCTGGTGAGCGACGG
GATCGGCGCGCTTGTGGGCGGCATCCTGCCCTTTGCCGATGGCGCGGCCTTCAGTCAGGGCAAGGTGACACCCTTTGCGC
GCGGTGGCGTGGTGTCCTCGCCGACGCATTTCCCGATGCGCGGCGGGCTTGGCCTGATGGGCGAAGCGGGGCCGGAGGCG
ATCCTGCCATTGGCGCGCGGCCATGACGGCAGCCTTGGTGTCAAGACGCAAGGCGGCGGCACATCTCCGACCGTGGTGAT
GCATGTCACAACCCCCGACGTGGCCGGGTTCCAGCGCTCCCGTGGGCAGATCGCAGCCCAGATGAGCCGCATGCTCGCAC
GCGGAAACCGCAATCGCTAA

Upstream 100 bases:

>100_bases
CCTTGATGCCAGCACACCGCCCATGGACCGCGACCGCCTGAGCCATCTGATGACGCAGTTCCCGGATCATATCAACGACG
TGAATCAACCGGAGTAACCC

Downstream 100 bases:

>100_bases
GGAGGCTAAGCCTATGAGTTTTCACGAAGTTCGTTTTCCCGAAACGCTCTCTTTTGGCTCTGTTGGCGGGCCGGAGCGGC
GCACGGATGTGGTGACGCTG

Product: phage-related minor tail protein-like

Products: NA

Alternate protein names: Tail Tape Measure Protein; Gene Transfer Agent Like Protein; Phage Tail Minor Protein; Phage-Related Minor Tail Protein-Like; PHage Minor Tail Protein H; Tape Measure Domain Protein; Phage Tail Tape Measure Protein Lambda; Phage-Related Minor Tail Protein-Like Protein; Gene Transfer Agent Protein

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MANTTDSDFESQTGPLEDSLGDAAGMAAQFTAEMDRVRAAFAATQADAADFETGLSRGLRRAMKDLVVDGDSLSDALTGL
AKTMIDTTFNSAMRPVTDHLGGLVSDGIGALVGGILPFADGAAFSQGKVTPFARGGVVSSPTHFPMRGGLGLMGEAGPEA
ILPLARGHDGSLGVKTQGGGTSPTVVMHVTTPDVAGFQRSRGQIAAQMSRMLARGNRNR

Sequences:

>Translated_219_residues
MANTTDSDFESQTGPLEDSLGDAAGMAAQFTAEMDRVRAAFAATQADAADFETGLSRGLRRAMKDLVVDGDSLSDALTGL
AKTMIDTTFNSAMRPVTDHLGGLVSDGIGALVGGILPFADGAAFSQGKVTPFARGGVVSSPTHFPMRGGLGLMGEAGPEA
ILPLARGHDGSLGVKTQGGGTSPTVVMHVTTPDVAGFQRSRGQIAAQMSRMLARGNRNR
>Mature_218_residues
ANTTDSDFESQTGPLEDSLGDAAGMAAQFTAEMDRVRAAFAATQADAADFETGLSRGLRRAMKDLVVDGDSLSDALTGLA
KTMIDTTFNSAMRPVTDHLGGLVSDGIGALVGGILPFADGAAFSQGKVTPFARGGVVSSPTHFPMRGGLGLMGEAGPEAI
LPLARGHDGSLGVKTQGGGTSPTVVMHVTTPDVAGFQRSRGQIAAQMSRMLARGNRNR

Specific function: Unknown

COG id: COG5281

COG function: function code S; Phage-related minor tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22468; Mature: 22336

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTTDSDFESQTGPLEDSLGDAAGMAAQFTAEMDRVRAAFAATQADAADFETGLSRGLR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMKDLVVDGDSLSDALTGLAKTMIDTTFNSAMRPVTDHLGGLVSDGIGALVGGILPFAD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAFSQGKVTPFARGGVVSSPTHFPMRGGLGLMGEAGPEAILPLARGHDGSLGVKTQGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCC
TSPTVVMHVTTPDVAGFQRSRGQIAAQMSRMLARGNRNR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ANTTDSDFESQTGPLEDSLGDAAGMAAQFTAEMDRVRAAFAATQADAADFETGLSRGLR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAMKDLVVDGDSLSDALTGLAKTMIDTTFNSAMRPVTDHLGGLVSDGIGALVGGILPFAD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAFSQGKVTPFARGGVVSSPTHFPMRGGLGLMGEAGPEAILPLARGHDGSLGVKTQGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCC
TSPTVVMHVTTPDVAGFQRSRGQIAAQMSRMLARGNRNR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA