Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080870

Identifier: 99080870

GI number: 99080870

Start: 1107741

End: 1108124

Strand: Direct

Name: 99080870

Synonym: TM1040_1029

Alternate gene names: NA

Gene position: 1107741-1108124 (Clockwise)

Preceding gene: 99080869

Following gene: 99080871

Centisome position: 34.61

GC content: 53.65

Gene sequence:

>384_bases
ATGACGACCTCGTCCCCCCGGATCCTGTTGATCGACGACTGCGATGCGGATCGCTATTTTTTCAAACGCAACCTGCGCAA
GCTCGATCCGGAAGCAAGATTGATCGAATTTGCCTATGCGGATGAGGCGCTCGAATATCTGAAGACCCCCGGAAAGGCGC
CTGTGGACTTCATCTTTGTCGATATCGACATGCCCAGACTGAACGGGTTTCAATTCGCGGATGTCTATCATTCGCTTTAT
CCTGAACTAAAAGGGCATGCGCGGCTTTTTGTCTGCTCGTCCTCCATCGACCCAACGCACCGCCAGCGCACAGAAGACCA
TCCCGACATCGACGGGTTCTATGAAAAGCCGCTGTCGCGTGATGCACTGAACGAGATCCTCTGA

Upstream 100 bases:

>100_bases
CACGGTGGGCAGCTCGAGGTGGTCGAAGCCGAGACCGGCGGCGCCAGCTTCCGTTTCACCCTACCGGCAGCCCCTGCCGC
CCCAGACGGAGCGTGACGCC

Downstream 100 bases:

>100_bases
GATGGGGGGGCTGCGCATGCTCTTCTTGGGTCTGTTGACCTTTGCGTGTGCCTTGGCTCTCTTGATGGGCGCCTCTCTGG
CGCAATCTCAGGAGACCGTG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTTSSPRILLIDDCDADRYFFKRNLRKLDPEARLIEFAYADEALEYLKTPGKAPVDFIFVDIDMPRLNGFQFADVYHSLY
PELKGHARLFVCSSSIDPTHRQRTEDHPDIDGFYEKPLSRDALNEIL

Sequences:

>Translated_127_residues
MTTSSPRILLIDDCDADRYFFKRNLRKLDPEARLIEFAYADEALEYLKTPGKAPVDFIFVDIDMPRLNGFQFADVYHSLY
PELKGHARLFVCSSSIDPTHRQRTEDHPDIDGFYEKPLSRDALNEIL
>Mature_126_residues
TTSSPRILLIDDCDADRYFFKRNLRKLDPEARLIEFAYADEALEYLKTPGKAPVDFIFVDIDMPRLNGFQFADVYHSLYP
ELKGHARLFVCSSSIDPTHRQRTEDHPDIDGFYEKPLSRDALNEIL

Specific function: Unknown

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14771; Mature: 14640

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSPRILLIDDCDADRYFFKRNLRKLDPEARLIEFAYADEALEYLKTPGKAPVDFIFV
CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DIDMPRLNGFQFADVYHSLYPELKGHARLFVCSSSIDPTHRQRTEDHPDIDGFYEKPLSR
EECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCHHHCCCCH
DALNEIL
HHHHHCC
>Mature Secondary Structure 
TTSSPRILLIDDCDADRYFFKRNLRKLDPEARLIEFAYADEALEYLKTPGKAPVDFIFV
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DIDMPRLNGFQFADVYHSLYPELKGHARLFVCSSSIDPTHRQRTEDHPDIDGFYEKPLSR
EECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCHHHCCCCH
DALNEIL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA