| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 99080860
GI number: 99080860
Start: 1090440
End: 1091252
Strand: Reverse
Name: mltB [H]
Synonym: TM1040_1019
Alternate gene names: 99080860
Gene position: 1091252-1090440 (Counterclockwise)
Preceding gene: 99080861
Following gene: 99080859
Centisome position: 34.09
GC content: 62.12
Gene sequence:
>813_bases ATGCTGTTTTCCCGTCTCGCCGCCCTTGGTCTTGTGACCTGCCTTGCCGTTGCCACCCCCGAGGTCGTGCGCGCCGCGAG TTGTGGCAACACCGCCGCGGGGTTTGAAGCCTGGAAGGCCGATTTTGCGCGCACGGCCAAACGGGCCGGGGTCCGTCAGG CCGGGCTCAACGCGCTGGCGCAAACCCGATATGCCACCGGCACCATCGCCGCCGACCGCAATCAGAAGAGCTTTCGCTAT AGTCTTGAGAAGTTCATGCAGGTGCGCGGCGCGACAACCATCGTGGCACAGGGCCGCCGTCACAAGGCCCGCAATGCAGA GTTCTTTGCCGCGCTTGAGCGCAAATATGGCGTGCCGGCGGGGCTGTTGATCGCCATTCATGGCATGGAGACCGCCTTTG GCAATTATATGGGCGACAGTCAGGTGGTGTCGTCGATTGTGACCCTCACCTATGACTGCCGCCGCTCGGAGTTTTTTGAA CCCCACGCCATCGGCGCGCTCAAGCTCGTGGATCAGGGTGCGATCTCGATGGCCACCAAAGGTGCGAAACACGGGGAGCT GGGCCACACGCAGTTTCTGCCAGGCAACGCACTGAAATATGGTCAGGACTGGAACCGCGACGGGCGGGTGGATTTCTACG ACATGGGCGACGCACTCGCCTCTACCGCGCATTTCCTGCGTCAAAAAGGCTGGCGGCCGGGCAAAGGCTATCAGCAGGGC GAGCCCAACTACAAAGTGCTCAAACAATGGAATGCCGCCACCGTGTACCAGCAGTCCCTCGCCATCATGGGCCGGCAGAT CGACGGCTCCTGA
Upstream 100 bases:
>100_bases TGGCGCCGCCTGACAAAAGCTCCCCGCAAATAAGAGATGAAAACAGAGGCTCCGGCGCGTAGGTTGATCCTATCCGCGCC ATTTCCAATGAGGGTCTTTC
Downstream 100 bases:
>100_bases GCCTGAGATCCGGGCGTTAAGAACAATCAACGACGAGGTCGCCAGATTGTAAGGGCTTGGGCATCAATGTGGCTGTCAGA GGTCCAGTTCCTGCCGCATT
Product: hypothetical protein
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLFSRLAALGLVTCLAVATPEVVRAASCGNTAAGFEAWKADFARTAKRAGVRQAGLNALAQTRYATGTIAADRNQKSFRY SLEKFMQVRGATTIVAQGRRHKARNAEFFAALERKYGVPAGLLIAIHGMETAFGNYMGDSQVVSSIVTLTYDCRRSEFFE PHAIGALKLVDQGAISMATKGAKHGELGHTQFLPGNALKYGQDWNRDGRVDFYDMGDALASTAHFLRQKGWRPGKGYQQG EPNYKVLKQWNAATVYQQSLAIMGRQIDGS
Sequences:
>Translated_270_residues MLFSRLAALGLVTCLAVATPEVVRAASCGNTAAGFEAWKADFARTAKRAGVRQAGLNALAQTRYATGTIAADRNQKSFRY SLEKFMQVRGATTIVAQGRRHKARNAEFFAALERKYGVPAGLLIAIHGMETAFGNYMGDSQVVSSIVTLTYDCRRSEFFE PHAIGALKLVDQGAISMATKGAKHGELGHTQFLPGNALKYGQDWNRDGRVDFYDMGDALASTAHFLRQKGWRPGKGYQQG EPNYKVLKQWNAATVYQQSLAIMGRQIDGS >Mature_270_residues MLFSRLAALGLVTCLAVATPEVVRAASCGNTAAGFEAWKADFARTAKRAGVRQAGLNALAQTRYATGTIAADRNQKSFRY SLEKFMQVRGATTIVAQGRRHKARNAEFFAALERKYGVPAGLLIAIHGMETAFGNYMGDSQVVSSIVTLTYDCRRSEFFE PHAIGALKLVDQGAISMATKGAKHGELGHTQFLPGNALKYGQDWNRDGRVDFYDMGDALASTAHFLRQKGWRPGKGYQQG EPNYKVLKQWNAATVYQQSLAIMGRQIDGS
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=121, Percent_Identity=31.404958677686, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 29479; Mature: 29479
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSRLAALGLVTCLAVATPEVVRAASCGNTAAGFEAWKADFARTAKRAGVRQAGLNALA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QTRYATGTIAADRNQKSFRYSLEKFMQVRGATTIVAQGRRHKARNAEFFAALERKYGVPA HHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCC GLLIAIHGMETAFGNYMGDSQVVSSIVTLTYDCRRSEFFEPHAIGALKLVDQGAISMATK EEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHC GAKHGELGHTQFLPGNALKYGQDWNRDGRVDFYDMGDALASTAHFLRQKGWRPGKGYQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC EPNYKVLKQWNAATVYQQSLAIMGRQIDGS CCCHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLFSRLAALGLVTCLAVATPEVVRAASCGNTAAGFEAWKADFARTAKRAGVRQAGLNALA CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QTRYATGTIAADRNQKSFRYSLEKFMQVRGATTIVAQGRRHKARNAEFFAALERKYGVPA HHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCC GLLIAIHGMETAFGNYMGDSQVVSSIVTLTYDCRRSEFFEPHAIGALKLVDQGAISMATK EEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHC GAKHGELGHTQFLPGNALKYGQDWNRDGRVDFYDMGDALASTAHFLRQKGWRPGKGYQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC EPNYKVLKQWNAATVYQQSLAIMGRQIDGS CCCHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]