| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080827
Identifier: 99080827
GI number: 99080827
Start: 1054261
End: 1054578
Strand: Reverse
Name: 99080827
Synonym: TM1040_0986
Alternate gene names: NA
Gene position: 1054578-1054261 (Counterclockwise)
Preceding gene: 99080828
Following gene: 99080826
Centisome position: 32.95
GC content: 55.66
Gene sequence:
>318_bases ATGGCAGAGCCCTCTGCGTTTGTTCGGGACAATCTTGCTACGAGGGCCTTTGGCGGAATTGCCCCCCTGCTCTTTGCGGA TCGCGCCAAGCGCGTGTCTCTGCGCGTCCTTCAGGCTGACCGAAGGAGCGGATACACCAATGAGGCGTCTGCCTTTCATC GGACTATTTTCAATACCTTAGTCGAGCCTTGCGAAAGGCCACACTGTTGGATCAGCGATCCCAGTCCAAACGGGATCGGC GCGAAACAATCCCGTTCAAAGACTCTCAACAAGGATTGGGATTGCGCGTCTTTTTGCGCCATTGCGATGACAGCCTGA
Upstream 100 bases:
>100_bases CCCGCGCCAGAACACTCCGGCCTGTCCCTACCCACATTGTCGCCAACCAGTCGTTTCAGGTCACTCAACCGATAACCGCG CGTGTTGGAGCGCCCTCTAC
Downstream 100 bases:
>100_bases CTGCCACACGGCCGTGCCCAATCATCCTCTATCTGATAGGCGCGGACGCCTCGAGGATGGCGCGCATTGCACAGGGCACG AATGAGCCTGCGCCCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAEPSAFVRDNLATRAFGGIAPLLFADRAKRVSLRVLQADRRSGYTNEASAFHRTIFNTLVEPCERPHCWISDPSPNGIG AKQSRSKTLNKDWDCASFCAIAMTA
Sequences:
>Translated_105_residues MAEPSAFVRDNLATRAFGGIAPLLFADRAKRVSLRVLQADRRSGYTNEASAFHRTIFNTLVEPCERPHCWISDPSPNGIG AKQSRSKTLNKDWDCASFCAIAMTA >Mature_104_residues AEPSAFVRDNLATRAFGGIAPLLFADRAKRVSLRVLQADRRSGYTNEASAFHRTIFNTLVEPCERPHCWISDPSPNGIGA KQSRSKTLNKDWDCASFCAIAMTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11573; Mature: 11442
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPSAFVRDNLATRAFGGIAPLLFADRAKRVSLRVLQADRRSGYTNEASAFHRTIFNTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VEPCERPHCWISDPSPNGIGAKQSRSKTLNKDWDCASFCAIAMTA HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure AEPSAFVRDNLATRAFGGIAPLLFADRAKRVSLRVLQADRRSGYTNEASAFHRTIFNTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VEPCERPHCWISDPSPNGIGAKQSRSKTLNKDWDCASFCAIAMTA HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA