| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yjhQ [C]
Identifier: 99080818
GI number: 99080818
Start: 1043784
End: 1044398
Strand: Direct
Name: yjhQ [C]
Synonym: TM1040_0977
Alternate gene names: 99080818
Gene position: 1043784-1044398 (Clockwise)
Preceding gene: 99080817
Following gene: 99080820
Centisome position: 32.61
GC content: 58.21
Gene sequence:
>615_bases ATGCTCTGGTCTTGCGGTGGTATTGCAACAGCGAATTTGGAAGGACAGCATATGATTTTATCTGAGGGAATCGCGGGGCA GGAGGCGCAGTTCATCGCGCTCTTTGAGGCAACCTTTGCAGCGTCCGAAGGCGCCAGCGAAGGTGCCGTGATCGGCGGTC TTGTCAGGGCCCTGTTGTCCAAAACCCCGTCCGAGGACATCTATGTTTTTACGGCGCATGACACACCGCATGACACCGCT CATGACAAAGACACGCTCATTGGCGTGGCCATTTTTTCTCGCCTTGTCTATGCGGAGGACCCGCGCTCTGTGTTCATCCT GTCGCCGATGGCAGTGGCAAGCCATCGGCAGGGGCAGGGAGTCGGGCAGGCGCTGTTGAGACATGCGTTGACCAAGCTGC GAGATGCGGGTGTCGACGTGGCAATCACCTATGGCGATCCAGCCTTCTATGGAAAGATCGGATTTGAGCCGCTCGACCCT GAGAGGGTCGCCGCGCCCTTGCCATTGAGCATGCCGATTGGGTGGATCGGTCAATCCCTGACGGAGACACCCTTGGTCGC GCTGAAAGGCGCCTGCAGCTGTGTTGAAGCCCTGAACGACCCATCCATTTGGTAG
Upstream 100 bases:
>100_bases TGCTGGGGACGCGCGGAGTGTGCCGCCTGCATCTGCGCGTACGTGACATCTTCTGTGGCGCAGTGCACGCTGGATACGCT CCGTGTGACGGGATGACTTC
Downstream 100 bases:
>100_bases CGCACGCCTGTCTTTGCCCGGACTTTTCCCGGACGCAGGGACTGCGGCTCTCGGCAGCGTAACCCTTCTCGCGATCATGG TCAGGCATTCGGCCCACAAG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLWSCGGIATANLEGQHMILSEGIAGQEAQFIALFEATFAASEGASEGAVIGGLVRALLSKTPSEDIYVFTAHDTPHDTA HDKDTLIGVAIFSRLVYAEDPRSVFILSPMAVASHRQGQGVGQALLRHALTKLRDAGVDVAITYGDPAFYGKIGFEPLDP ERVAAPLPLSMPIGWIGQSLTETPLVALKGACSCVEALNDPSIW
Sequences:
>Translated_204_residues MLWSCGGIATANLEGQHMILSEGIAGQEAQFIALFEATFAASEGASEGAVIGGLVRALLSKTPSEDIYVFTAHDTPHDTA HDKDTLIGVAIFSRLVYAEDPRSVFILSPMAVASHRQGQGVGQALLRHALTKLRDAGVDVAITYGDPAFYGKIGFEPLDP ERVAAPLPLSMPIGWIGQSLTETPLVALKGACSCVEALNDPSIW >Mature_204_residues MLWSCGGIATANLEGQHMILSEGIAGQEAQFIALFEATFAASEGASEGAVIGGLVRALLSKTPSEDIYVFTAHDTPHDTA HDKDTLIGVAIFSRLVYAEDPRSVFILSPMAVASHRQGQGVGQALLRHALTKLRDAGVDVAITYGDPAFYGKIGFEPLDP ERVAAPLPLSMPIGWIGQSLTETPLVALKGACSCVEALNDPSIW
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 21545; Mature: 21545
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWSCGGIATANLEGQHMILSEGIAGQEAQFIALFEATFAASEGASEGAVIGGLVRALLS CEECCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHH KTPSEDIYVFTAHDTPHDTAHDKDTLIGVAIFSRLVYAEDPRSVFILSPMAVASHRQGQG CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCC VGQALLRHALTKLRDAGVDVAITYGDPAFYGKIGFEPLDPERVAAPLPLSMPIGWIGQSL HHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCHHHHCCCCCCCCCHHHHCCCH TETPLVALKGACSCVEALNDPSIW HCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLWSCGGIATANLEGQHMILSEGIAGQEAQFIALFEATFAASEGASEGAVIGGLVRALLS CEECCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHH KTPSEDIYVFTAHDTPHDTAHDKDTLIGVAIFSRLVYAEDPRSVFILSPMAVASHRQGQG CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCC VGQALLRHALTKLRDAGVDVAITYGDPAFYGKIGFEPLDPERVAAPLPLSMPIGWIGQSL HHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCHHHHCCCCCCCCCHHHHCCCH TETPLVALKGACSCVEALNDPSIW HCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA