| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is rhlE [H]
Identifier: 99080768
GI number: 99080768
Start: 989796
End: 991133
Strand: Reverse
Name: rhlE [H]
Synonym: TM1040_0927
Alternate gene names: 99080768
Gene position: 991133-989796 (Counterclockwise)
Preceding gene: 99080771
Following gene: 99080766
Centisome position: 30.96
GC content: 64.42
Gene sequence:
>1338_bases ATGACCGAATTCTCCTCTATGGACCTTCCCAAGCACCTGCACACCCGCATGGAAGCGATGGGGTTCAATACACCCACCCC GATTCAGGCGCGCGCCATTCCCCATGCGCTGAATGGTCAGGACGTGTTGGGCCTGGCCCAGACCGGCACCGGCAAGACCG CGGCCTTTGGCGTGCCGCTGGTGGCGCAGATGCTCGAATATGGTCGCAAGCCTGCGGCCGGTACAGTGCGCGGCCTGATC CTCGCTCCGACCCGCGAGCTGGCCAATCAGATCGCAGAGACCCTGCGCGGTCTCACCGAAGGCAGCCCGCTGAAGACCGG GCTCGTCGTGGGCGGCGTGTCGATCAACCCGCAGATCCACCGCCTGTCCAAAGGCACCGACATTCTGGTGGCCACCCCCG GCCGACTGCTCGACATCCTCGACCGCAAGGCGCTGGATCTGGGGTCTTGCGACTTTCTTGTTCTTGATGAGGCCGATCAA ATGCTCGACCTCGGGTTCATCCACGCCCTGCGCAAGATCGCGGCCCTCCTGCCCGAAGAGCGCCAGACCATGCTGTTCTC GGCCACGATGCCCAAGCAGATGAACGAGATCGCAAACGCCTATCTCAAGAGCCCCGTGCGCATCGAAGTGACCCCTCCGG GCAAACCCGCCGCCAAGGTCACACAATCGGTTCATTTCATCGCCAAGGCGGAAAAGCTGAGCCTTCTCAAAGAGCTGCTC TCTGCCCATGATGGCGAGCGCACGCTGGTCTTTGGCCGCACCAAACATGGCATGGAAAAGCTGATGAAGGTGCTGGACAA GGCAGGCTTCAAGGCAGCGGCGATCCACGGCAACAAGAGCCAGGGCCAGCGCGAGCGCGCGCTGAAAGCGTTCAAATCGG GCGAAATCACCGTGCTTGTGGCCACCGATGTGGCCGCGCGCGGGCTTGATATTCCCGATGTGAAATACGTCTACAACTAC GAGCTGCCCAATGTGCCGGATGCCTATGTGCACCGCATCGGTCGCACCGCACGTGCAGGCAAAGACGGTCAGGCCGTCGC CTTCTGTGCGCCGGATGAGATTGGCGATCTGAAGGCGATCCAGAAAACCATGGGCATCACCATCCCCGTGGCCTCTGGTC GCGCCTGGGAAGAGCTGCCGGACCCCGCAGCCAAACCCGCACGCGGTGGCGGACGCGGTCGCCCCGGCGGCGGCGGCGGT GGCCGTGGCAAAGGCGGTGGCAAGCCTGGCGGCGGTCGTCGTCGCTTTGGCGGTGGCAAATCCGCAGCCCCCTCGGGGGG CGCAGGCGAATCCCGTGGTGCCGCTGGTGCGGGTGGACGGCAGCGGCGCAAGTCCTGA
Upstream 100 bases:
>100_bases GTCTGAGGTCTCCGCCCCACTGAATGATCGGGTATGCGGCATCTGGCCCTGCCCGAAACGGTTGCGCGCCTCGAGGCTGC AGCCGTCGAAAGGACTTTGA
Downstream 100 bases:
>100_bases TCGACCTTGGTGCCACTCACCTGTCTTTGTCGGGGAAAGGCGGCGCCAGCACATCTGGTTGATCGCAAATGAGAAATCGC AACGCGGGCTCAAGACAGCG
Product: DEAD/DEAH box helicase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTEFSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPLVAQMLEYGRKPAAGTVRGLI LAPTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIHRLSKGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQ MLDLGFIHALRKIAALLPEERQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELL SAHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIPDVKYVYNY ELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGG GRGKGGGKPGGGRRRFGGGKSAAPSGGAGESRGAAGAGGRQRRKS
Sequences:
>Translated_445_residues MTEFSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPLVAQMLEYGRKPAAGTVRGLI LAPTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIHRLSKGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQ MLDLGFIHALRKIAALLPEERQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELL SAHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIPDVKYVYNY ELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGG GRGKGGGKPGGGRRRFGGGKSAAPSGGAGESRGAAGAGGRQRRKS >Mature_444_residues TEFSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPLVAQMLEYGRKPAAGTVRGLIL APTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIHRLSKGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQM LDLGFIHALRKIAALLPEERQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELLS AHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIPDVKYVYNYE LPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGGG RGKGGGKPGGGRRRFGGGKSAAPSGGAGESRGAAGAGGRQRRKS
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=38.8739946380697, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=38.8739946380697, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI4758138, Length=360, Percent_Identity=39.1666666666667, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=40.7608695652174, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=40.7608695652174, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=40.7608695652174, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI169881239, Length=432, Percent_Identity=38.4259259259259, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI13514809, Length=432, Percent_Identity=38.4259259259259, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI41327771, Length=406, Percent_Identity=37.6847290640394, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=41.5977961432507, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI21071032, Length=370, Percent_Identity=39.1891891891892, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=39.5480225988701, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=39.5480225988701, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=39.5480225988701, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=39.5480225988701, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=37.3297002724796, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI188035877, Length=352, Percent_Identity=38.9204545454545, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=37.0165745856354, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=37.0165745856354, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=35.792349726776, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=37.5675675675676, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=37.5675675675676, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI222352149, Length=334, Percent_Identity=40.1197604790419, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=36.6310160427808, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI55749865, Length=336, Percent_Identity=38.6904761904762, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI41327779, Length=375, Percent_Identity=39.4666666666667, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=36.1979166666667, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI41327773, Length=373, Percent_Identity=35.9249329758713, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=35.1851851851852, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=35.7702349869452, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI164664518, Length=380, Percent_Identity=31.5789473684211, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=33.7874659400545, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=35.4838709677419, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=32.7956989247312, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI83700235, Length=380, Percent_Identity=33.1578947368421, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=32.7956989247312, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=32.9815303430079, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI21040371, Length=336, Percent_Identity=32.1428571428571, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=31.6939890710383, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=31.6939890710383, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI256223453, Length=393, Percent_Identity=32.5699745547074, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=31.6176470588235, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI9966805, Length=371, Percent_Identity=31.266846361186, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=28.75, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=29.7560975609756, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI164419732, Length=386, Percent_Identity=31.3471502590674, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI6005743, Length=359, Percent_Identity=32.5905292479109, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI8922886, Length=359, Percent_Identity=32.3119777158774, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=32.9446064139942, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=29.2035398230088, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI62241024, Length=321, Percent_Identity=32.0872274143302, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=29.4117647058824, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=35.3488372093023, Blast_Score=109, Evalue=6e-24, Organism=Escherichia coli, GI1787016, Length=387, Percent_Identity=48.062015503876, Blast_Score=350, Evalue=9e-98, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=42.2459893048128, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI1790214, Length=421, Percent_Identity=38.9548693586698, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787605, Length=375, Percent_Identity=40.2666666666667, Blast_Score=251, Evalue=9e-68, Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=41.7910447761194, Blast_Score=240, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=41.5977961432507, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI115533224, Length=430, Percent_Identity=37.2093023255814, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI32565321, Length=414, Percent_Identity=37.9227053140097, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=39.3939393939394, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17510309, Length=344, Percent_Identity=42.1511627906977, Blast_Score=254, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17510307, Length=359, Percent_Identity=41.5041782729805, Blast_Score=254, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71995514, Length=344, Percent_Identity=42.1511627906977, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17507945, Length=380, Percent_Identity=38.6842105263158, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=36.6233766233766, Blast_Score=241, Evalue=5e-64, Organism=Caenorhabditis elegans, GI71999646, Length=369, Percent_Identity=35.5013550135501, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71999644, Length=374, Percent_Identity=35.0267379679144, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI86570094, Length=399, Percent_Identity=37.0927318295739, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71987143, Length=382, Percent_Identity=33.5078534031414, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=34.9726775956284, Blast_Score=228, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=34.6994535519126, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=34.6666666666667, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115532548, Length=375, Percent_Identity=34.6666666666667, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17507881, Length=388, Percent_Identity=35.8247422680412, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.5795148247978, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=33.6842105263158, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=31.8801089918256, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17552642, Length=451, Percent_Identity=32.5942350332594, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=34.7708894878706, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=36.7847411444142, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=35.792349726776, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17509811, Length=337, Percent_Identity=34.4213649851632, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=32.2033898305085, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17556951, Length=373, Percent_Identity=31.0991957104558, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=32.3684210526316, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=34.4559585492228, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=34.3163538873995, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193206561, Length=352, Percent_Identity=30.9659090909091, Blast_Score=161, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17508543, Length=372, Percent_Identity=29.5698924731183, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=25.615763546798, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17553716, Length=376, Percent_Identity=28.4574468085106, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17536103, Length=383, Percent_Identity=28.7206266318538, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17536101, Length=383, Percent_Identity=28.7206266318538, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17536099, Length=383, Percent_Identity=28.7206266318538, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI25148291, Length=329, Percent_Identity=26.7477203647416, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148205, Length=352, Percent_Identity=25.2840909090909, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=32.1608040201005, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71997889, Length=399, Percent_Identity=27.8195488721804, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI71987152, Length=115, Percent_Identity=35.6521739130435, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32564293, Length=360, Percent_Identity=25.2777777777778, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=41.5343915343915, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=41.1609498680739, Blast_Score=280, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=39.3530997304582, Blast_Score=265, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=381, Percent_Identity=38.8451443569554, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=42.2619047619048, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=39.8305084745763, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=33.8753387533875, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=34.1463414634146, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320173, Length=424, Percent_Identity=32.5471698113208, Blast_Score=222, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=366, Percent_Identity=36.6120218579235, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=35.4666666666667, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=417, Percent_Identity=33.3333333333333, Blast_Score=205, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321111, Length=356, Percent_Identity=34.5505617977528, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=382, Percent_Identity=33.5078534031414, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=382, Percent_Identity=33.5078534031414, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=344, Percent_Identity=34.593023255814, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321267, Length=414, Percent_Identity=34.5410628019324, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=429, Percent_Identity=31.7016317016317, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=32.3529411764706, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=389, Percent_Identity=31.3624678663239, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=395, Percent_Identity=31.3924050632911, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=28.0871670702179, Blast_Score=155, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6322876, Length=431, Percent_Identity=27.3781902552204, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=28.6931818181818, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=406, Percent_Identity=25.8620689655172, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323844, Length=386, Percent_Identity=22.7979274611399, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=40.9574468085106, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=41.1924119241192, Blast_Score=281, Evalue=7e-76, Organism=Drosophila melanogaster, GI18857967, Length=468, Percent_Identity=35.2564102564103, Blast_Score=276, Evalue=3e-74, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=39.8936170212766, Blast_Score=264, Evalue=7e-71, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=39.4366197183099, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=39.2156862745098, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=39.1184573002755, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=36.1185983827493, Blast_Score=251, Evalue=8e-67, Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=36.1185983827493, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=36.1185983827493, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=36.3881401617251, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=36.1185983827493, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=36.1185983827493, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=36.1185983827493, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI21356161, Length=372, Percent_Identity=38.9784946236559, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=37.431693989071, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI21355075, Length=377, Percent_Identity=37.6657824933687, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI28575014, Length=358, Percent_Identity=36.8715083798883, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI24583281, Length=395, Percent_Identity=32.9113924050633, Blast_Score=228, Evalue=9e-60, Organism=Drosophila melanogaster, GI24583279, Length=395, Percent_Identity=32.9113924050633, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=33.6065573770492, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=38.1766381766382, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=38.2911392405063, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24582080, Length=378, Percent_Identity=34.9206349206349, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24582078, Length=378, Percent_Identity=34.9206349206349, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI17136248, Length=378, Percent_Identity=34.9206349206349, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24582075, Length=378, Percent_Identity=34.9206349206349, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=34.9206349206349, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=34.9206349206349, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=37.3015873015873, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=33.7801608579088, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=31.8877551020408, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=34.3163538873995, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI20130173, Length=455, Percent_Identity=29.2307692307692, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=31.2676056338028, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=31.2676056338028, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=31.2676056338028, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI17647335, Length=389, Percent_Identity=27.7634961439589, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24643725, Length=407, Percent_Identity=26.044226044226, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=26.2108262108262, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI19920478, Length=359, Percent_Identity=31.4763231197772, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=28.1437125748503, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=27.5943396226415, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=35.8585858585859, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=35.8585858585859, Blast_Score=116, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46878; Mature: 46747
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH VAQMLEYGRKPAAGTVRGLILAPTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIH HHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEECEECCCHHH RLSKGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEE HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELL HHEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLV HHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEE ATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAI ECCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH QKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGGGRGKGGGKPGGGRRRFGGGK HHHHCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAAPSGGAGESRGAAGAGGRQRRKS CCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TEFSSMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPL CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH VAQMLEYGRKPAAGTVRGLILAPTRELANQIAETLRGLTEGSPLKTGLVVGGVSINPQIH HHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEECEECCCHHH RLSKGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEE HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC RQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELL HHEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLV HHCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEE ATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAI ECCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH QKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGGGRGKGGGKPGGGRRRFGGGK HHHHCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAAPSGGAGESRGAAGAGGRQRRKS CCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]