Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080749

Identifier: 99080749

GI number: 99080749

Start: 969526

End: 969846

Strand: Direct

Name: 99080749

Synonym: TM1040_0908

Alternate gene names: NA

Gene position: 969526-969846 (Clockwise)

Preceding gene: 99080748

Following gene: 99080751

Centisome position: 30.29

GC content: 68.22

Gene sequence:

>321_bases
ATGGGGTTTGAGCGGATCGCGAACATGGTTCTGCGGCGACTGATTGGACGGGCGGTGAATGCGGGCGTAAGCGCAGGTAT
CAAGGCCGTCGCCAAACGCAGTCCAGCCAAGGGAGGTGGACGCCACACCACAGGGGCCCCTGTGGGTCACCGCCCCGGCG
CGCCGGTGAAGGCGGAACCTGATAGAAACCCAGATCCGCAGACCGAAATCCTGACCGAGGCGCAGGTCCGGGCCGCAGCC
GACGCAAAGGCCGAGCGCGCGCGGATCCGAGAGATCAGGCAGGCGCGTCGGGCGCGCCGGGCTGGGCGGGATCCGTCGTA
A

Upstream 100 bases:

>100_bases
GCGCAAGAGACCCCGCACGTCGGAGCCTGTCGCGCGCCCAGAAAACGCCGTACTCCGCCATTATGGACTGCAGAGGAACC
CAAAACTCAGTGAGGATCGG

Downstream 100 bases:

>100_bases
AGGGCAGGCTGCTGCGCCGAAGGCTCAGTGCCTCGACCGCAGCAAGGGTGGTGAGCGCCGCCGAAATAAGCACACAGCCC
ATGATCCCGAGCGCTTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGFERIANMVLRRLIGRAVNAGVSAGIKAVAKRSPAKGGGRHTTGAPVGHRPGAPVKAEPDRNPDPQTEILTEAQVRAAA
DAKAERARIREIRQARRARRAGRDPS

Sequences:

>Translated_106_residues
MGFERIANMVLRRLIGRAVNAGVSAGIKAVAKRSPAKGGGRHTTGAPVGHRPGAPVKAEPDRNPDPQTEILTEAQVRAAA
DAKAERARIREIRQARRARRAGRDPS
>Mature_105_residues
GFERIANMVLRRLIGRAVNAGVSAGIKAVAKRSPAKGGGRHTTGAPVGHRPGAPVKAEPDRNPDPQTEILTEAQVRAAAD
AKAERARIREIRQARRARRAGRDPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11320; Mature: 11189

Theoretical pI: Translated: 12.32; Mature: 12.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFERIANMVLRRLIGRAVNAGVSAGIKAVAKRSPAKGGGRHTTGAPVGHRPGAPVKAEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRNPDPQTEILTEAQVRAAADAKAERARIREIRQARRARRAGRDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GFERIANMVLRRLIGRAVNAGVSAGIKAVAKRSPAKGGGRHTTGAPVGHRPGAPVKAEP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRNPDPQTEILTEAQVRAAADAKAERARIREIRQARRARRAGRDPS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA