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The map label for this gene is scpA [H]

Identifier: 99080747

GI number: 99080747

Start: 967881

End: 968678

Strand: Direct

Name: scpA [H]

Synonym: TM1040_0906

Alternate gene names: 99080747

Gene position: 967881-968678 (Clockwise)

Preceding gene: 99080746

Following gene: 99080748

Centisome position: 30.24

GC content: 60.53

Gene sequence:

>798_bases
ATGGCTGACGAGAACACGCTTTTTCCAAAAGAGACACAGACGGTCGAGGAGCGGCTTGAGGCCGAGTCCCTGATCGTGGA
TGTGCAGGGCTTTGAAGGGCCGCTGGATTTGCTGTTGACGCTCTCGCGCACACAAAAAGTGGATCTGCGCCAGATCTCGG
TCTATGAACTCGCGCGCCAGTATCTGACCTTTGTGGAACGCGCCAAGGAGCTGCGCATCGAGCTTGCCGCCGATTATCTG
GTTATGGCCGCGTGGCTGGCGTTTCTGAAGTCCCGTCTGCTGCTCCCCCCCGATCCCGAAGAGGATGGTCCCACGGGCGA
GGAGCTGGCAGCACATCTGGCGTTTCAGCTTGAGCGGTTGCAGGCGATGCGCGATGCGGCCGCCCGGCTAATGGGCCGGG
ATCGGCTGGGGCGCGATTTCTTTGCCCGTGGGCAGGCCGAGGACGTGCAGCGCATCAAGACGGTGACCTATACCGCCAAC
CTTTTGGACCTGATGCAGGGCTATGCGCGCATCCGCACCAAGGATGAGTTCCGCCCCTTCGTGATGGACCGCGAGAGCGT
GTTCACCATGGAAGAAGCGCTCGAACGTATGCGCGGGCTGCTTGGATTTACCGGCAGCTGGACCGATATGTTGAGTTATT
TGCCAGATGGGTGGCACAGCGATCCGGTCAAACGGCGCTCGGCCACGGCCGCAACATTTGCCGCGTCGCTGCAATTGGTT
AAAGAAGGCAAGATGGAGATTCGCCAGACCGACAGTTTCGCCCCGATCCAGCTGCGCAACCGGCCCGAGGATAGCTAA

Upstream 100 bases:

>100_bases
CGGCGCGCCGAGGCGGCCCTGGCCTGCCGCAAGCCCCCTGTCGTGCTTGACACTGAGGCCGTGGAAGCGGAACTATCTGC
CCTCATGGGCGGACAGGTTT

Downstream 100 bases:

>100_bases
TGGACGACCACACCCTCAGCGATACGGCCTCGCCAGAGCGTTCAGACAGCGACAGCCTGTTTGACGCGCCGCCCATGGCC
GAGCAGGAGCGTATGGTGGA

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MADENTLFPKETQTVEERLEAESLIVDVQGFEGPLDLLLTLSRTQKVDLRQISVYELARQYLTFVERAKELRIELAADYL
VMAAWLAFLKSRLLLPPDPEEDGPTGEELAAHLAFQLERLQAMRDAAARLMGRDRLGRDFFARGQAEDVQRIKTVTYTAN
LLDLMQGYARIRTKDEFRPFVMDRESVFTMEEALERMRGLLGFTGSWTDMLSYLPDGWHSDPVKRRSATAATFAASLQLV
KEGKMEIRQTDSFAPIQLRNRPEDS

Sequences:

>Translated_265_residues
MADENTLFPKETQTVEERLEAESLIVDVQGFEGPLDLLLTLSRTQKVDLRQISVYELARQYLTFVERAKELRIELAADYL
VMAAWLAFLKSRLLLPPDPEEDGPTGEELAAHLAFQLERLQAMRDAAARLMGRDRLGRDFFARGQAEDVQRIKTVTYTAN
LLDLMQGYARIRTKDEFRPFVMDRESVFTMEEALERMRGLLGFTGSWTDMLSYLPDGWHSDPVKRRSATAATFAASLQLV
KEGKMEIRQTDSFAPIQLRNRPEDS
>Mature_264_residues
ADENTLFPKETQTVEERLEAESLIVDVQGFEGPLDLLLTLSRTQKVDLRQISVYELARQYLTFVERAKELRIELAADYLV
MAAWLAFLKSRLLLPPDPEEDGPTGEELAAHLAFQLERLQAMRDAAARLMGRDRLGRDFFARGQAEDVQRIKTVTYTANL
LDLMQGYARIRTKDEFRPFVMDRESVFTMEEALERMRGLLGFTGSWTDMLSYLPDGWHSDPVKRRSATAATFAASLQLVK
EGKMEIRQTDSFAPIQLRNRPEDS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30340; Mature: 30209

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADENTLFPKETQTVEERLEAESLIVDVQGFEGPLDLLLTLSRTQKVDLRQISVYELARQ
CCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLTFVERAKELRIELAADYLVMAAWLAFLKSRLLLPPDPEEDGPTGEELAAHLAFQLERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QAMRDAAARLMGRDRLGRDFFARGQAEDVQRIKTVTYTANLLDLMQGYARIRTKDEFRPF
HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH
VMDRESVFTMEEALERMRGLLGFTGSWTDMLSYLPDGWHSDPVKRRSATAATFAASLQLV
HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEGKMEIRQTDSFAPIQLRNRPEDS
HHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
ADENTLFPKETQTVEERLEAESLIVDVQGFEGPLDLLLTLSRTQKVDLRQISVYELARQ
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLTFVERAKELRIELAADYLVMAAWLAFLKSRLLLPPDPEEDGPTGEELAAHLAFQLERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QAMRDAAARLMGRDRLGRDFFARGQAEDVQRIKTVTYTANLLDLMQGYARIRTKDEFRPF
HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCH
VMDRESVFTMEEALERMRGLLGFTGSWTDMLSYLPDGWHSDPVKRRSATAATFAASLQLV
HHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEGKMEIRQTDSFAPIQLRNRPEDS
HHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]