| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985924
Identifier: 94985924
GI number: 94985924
Start: 1938133
End: 1938837
Strand: Reverse
Name: 94985924
Synonym: Dgeo_1824
Alternate gene names: NA
Gene position: 1938837-1938133 (Counterclockwise)
Preceding gene: 94985928
Following gene: 94985923
Centisome position: 78.58
GC content: 62.13
Gene sequence:
>705_bases ATGAGGACGCGCGGCCAACCGTTCGGTCACAGCTTTGGCGCCCCGCCTCGCCCATCAGCAGAGGTCTTCACCCTTTCTTC ATGGTTCTTCACGTTACGGAACGGCGGGCTGCTCCCGCCCGTACCCTGGAGCATGACGAACCCTCTCCAGGCCAATCTCG CGGACATGTTCGGCCAGAGCATGGCGGTGCTGACGCGGCCCAGCCCCGCGACCTTTGAGTTGTTCGAACGGCGCGGGGGA ACTCGACAGGCTTTTGTCTATGTGCTGTTGGCCGCGCTGGTATCCGCCGTGATTGCCGCCCTTTTCGCGCCCTTTCACCA GGGCGTGACGGTGATTGGGCAGTTTATCACGCGCCTGATCCTGATTCCGGTCCAGTTCGGCATCTTTACCGGGCTGGTCT ATCTGATCGGCCGTTCGCTTTTCCGGGGCACCGGGAACTATCCGGAAGTCGCCTATACCTTCGCGCTGTTCTACGTGCCG CTCAGCATCGTCGGGACGGTGCTCGGCATCATTCCGATTCTGGGGTGGATTGTCGGCATCCTGATTGCCGCGCTGATGAT CTTCTTCGGGTACCTGGCCGTACAGTCCAGCATGAATCTGCGCGACACGGTGAGTGCGGCAGTGACGCTGGTGCTTTCTG GGGTCGCGTACTGGGTGGTGGGGGCACTCCTCCTGGCGCTGGTCCTCGCACCGTTTGTGCGCTGA
Upstream 100 bases:
>100_bases CCGACATTCGGCTTGCCGACGATGGCGACAAACCCGGCGTGGGTCGGCGTCTCGCCAGATTCAGGAGAGAGGGACTGATC CGTCATGGCGTGATTGTCGC
Downstream 100 bases:
>100_bases GGGACCGGAACTGTGTGGGGAGGGGTGAAGACTGCCCCTCCCTTGCGCTGTCCCTTGAGACTGTGTGCCTCTAGACTGCA CCTATGTCTCAGGACAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRTRGQPFGHSFGAPPRPSAEVFTLSSWFFTLRNGGLLPPVPWSMTNPLQANLADMFGQSMAVLTRPSPATFELFERRGG TRQAFVYVLLAALVSAVIAALFAPFHQGVTVIGQFITRLILIPVQFGIFTGLVYLIGRSLFRGTGNYPEVAYTFALFYVP LSIVGTVLGIIPILGWIVGILIAALMIFFGYLAVQSSMNLRDTVSAAVTLVLSGVAYWVVGALLLALVLAPFVR
Sequences:
>Translated_234_residues MRTRGQPFGHSFGAPPRPSAEVFTLSSWFFTLRNGGLLPPVPWSMTNPLQANLADMFGQSMAVLTRPSPATFELFERRGG TRQAFVYVLLAALVSAVIAALFAPFHQGVTVIGQFITRLILIPVQFGIFTGLVYLIGRSLFRGTGNYPEVAYTFALFYVP LSIVGTVLGIIPILGWIVGILIAALMIFFGYLAVQSSMNLRDTVSAAVTLVLSGVAYWVVGALLLALVLAPFVR >Mature_234_residues MRTRGQPFGHSFGAPPRPSAEVFTLSSWFFTLRNGGLLPPVPWSMTNPLQANLADMFGQSMAVLTRPSPATFELFERRGG TRQAFVYVLLAALVSAVIAALFAPFHQGVTVIGQFITRLILIPVQFGIFTGLVYLIGRSLFRGTGNYPEVAYTFALFYVP LSIVGTVLGIIPILGWIVGILIAALMIFFGYLAVQSSMNLRDTVSAAVTLVLSGVAYWVVGALLLALVLAPFVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25330; Mature: 25330
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRGQPFGHSFGAPPRPSAEVFTLSSWFFTLRNGGLLPPVPWSMTNPLQANLADMFGQS CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC MAVLTRPSPATFELFERRGGTRQAFVYVLLAALVSAVIAALFAPFHQGVTVIGQFITRLI CEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPVQFGIFTGLVYLIGRSLFRGTGNYPEVAYTFALFYVPLSIVGTVLGIIPILGWIVGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAALMIFFGYLAVQSSMNLRDTVSAAVTLVLSGVAYWVVGALLLALVLAPFVR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTRGQPFGHSFGAPPRPSAEVFTLSSWFFTLRNGGLLPPVPWSMTNPLQANLADMFGQS CCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC MAVLTRPSPATFELFERRGGTRQAFVYVLLAALVSAVIAALFAPFHQGVTVIGQFITRLI CEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIPVQFGIFTGLVYLIGRSLFRGTGNYPEVAYTFALFYVPLSIVGTVLGIIPILGWIVGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAALMIFFGYLAVQSSMNLRDTVSAAVTLVLSGVAYWVVGALLLALVLAPFVR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA