| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985895
Identifier: 94985895
GI number: 94985895
Start: 1912002
End: 1912964
Strand: Reverse
Name: 94985895
Synonym: Dgeo_1795
Alternate gene names: NA
Gene position: 1912964-1912002 (Counterclockwise)
Preceding gene: 94985896
Following gene: 94985888
Centisome position: 77.54
GC content: 70.09
Gene sequence:
>963_bases ATGGAAGGCATGTCGGCGCTCGTTTTCGTCCTGGGGGCCTCTGCCCTCGCCGCCACCTTGCCGTCGAAGGCCGTCCTGAG CGGCACCTGCTGTCCGGGGGCGGAGTGGACGCCGGACTCGCGCGCCCTTCTCTTTCTGGACGGGCCGCCCGCGCGGGGCA GCACGGGGATCTATCAGGTTTCGGCAGAAGGCGGCCCGGTCACCCGCCGCTTTTCCAGCGTGGCCTTCTATTCCCCCCGC CTGCTGTGGGCGGTGCGGCCCGGCACCGGCGTGAATACGACCCTGGAACGGCTGGTTGACGGGCGGAAGTTCACTCTCCC GACCTATGGCGCGGATGTGAGCTGGAATCGCGCCGAGACGCGGCTGGCCTACACCCGCAGCGCCACGACCGGTAACTACG ACCGCCGCATGACCCGCGTGTATGTGGCCGATGTGTTGGGTTCGCCCCGGCAGGTCGCCACCGTGTACGGCGGGGACATC GTGGGATGGGTGGACGACCGAACACTCCTGCTGACCGGCAAACGGAACGCCGCAAACCGTGACCGCGACCTCTTCACCCT AGATACCCGCAGCGGCGCGCGGCGTACCCTCGCCTCGGCGCTGGCCTTTCGGGGCGTCAGCCTCAGCCCGGACGGTGCCC GCGTCGTGTACACCGTCGCGTTCGACTCGCCCGCTCGCAACGGCCTCTGGCTTCAGCCCACGGCGGGCGGCACCCCGCGC AGACTGGACACCTTCGGCGCCTATCGCTGGCGCGATGCGGAGCACCTCCTCCTGATTCCCCTGCAACCGGACGGCAGCTC CCACCTCCTGCGCGAGTACGACCTGCGAACACACACCTGGCGGACCCTCGGCGACCTGGGGGACCAGGTGCGGCAGGGCG ACTGGTCCGTTAGCCCCGACGGGCGGCACCTGGCGTATCTGAGCGCGCGGGACGGGAACGTGCGGGTGGTGGCGCTGCCT TGA
Upstream 100 bases:
>100_bases CCGAGTCTCAGCCGGAGGTGCGGCGGGGCGGCCCGCTGCTGAACGATTTCACGCGGCCCTGGCCCCCCGCGCCGGGAGGT GCGCGGTGAAGCGGTGGCTG
Downstream 100 bases:
>100_bases GGGTCGCCCGTTTTGCGGCTGGCTGCGGGTGAAGGGTGACTACGTCAGGAAGAGCCGGTACGCCGCATTCTCCGTCATGT CCTGGGCCGGATACCCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MEGMSALVFVLGASALAATLPSKAVLSGTCCPGAEWTPDSRALLFLDGPPARGSTGIYQVSAEGGPVTRRFSSVAFYSPR LLWAVRPGTGVNTTLERLVDGRKFTLPTYGADVSWNRAETRLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDI VGWVDDRTLLLTGKRNAANRDRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPR RLDTFGAYRWRDAEHLLLIPLQPDGSSHLLREYDLRTHTWRTLGDLGDQVRQGDWSVSPDGRHLAYLSARDGNVRVVALP
Sequences:
>Translated_320_residues MEGMSALVFVLGASALAATLPSKAVLSGTCCPGAEWTPDSRALLFLDGPPARGSTGIYQVSAEGGPVTRRFSSVAFYSPR LLWAVRPGTGVNTTLERLVDGRKFTLPTYGADVSWNRAETRLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDI VGWVDDRTLLLTGKRNAANRDRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPR RLDTFGAYRWRDAEHLLLIPLQPDGSSHLLREYDLRTHTWRTLGDLGDQVRQGDWSVSPDGRHLAYLSARDGNVRVVALP >Mature_320_residues MEGMSALVFVLGASALAATLPSKAVLSGTCCPGAEWTPDSRALLFLDGPPARGSTGIYQVSAEGGPVTRRFSSVAFYSPR LLWAVRPGTGVNTTLERLVDGRKFTLPTYGADVSWNRAETRLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDI VGWVDDRTLLLTGKRNAANRDRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPR RLDTFGAYRWRDAEHLLLIPLQPDGSSHLLREYDLRTHTWRTLGDLGDQVRQGDWSVSPDGRHLAYLSARDGNVRVVALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34872; Mature: 34872
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGMSALVFVLGASALAATLPSKAVLSGTCCPGAEWTPDSRALLFLDGPPARGSTGIYQV CCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE SAEGGPVTRRFSSVAFYSPRLLWAVRPGTGVNTTLERLVDGRKFTLPTYGADVSWNRAET ECCCCCCHHHHCEEEEECCEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCE RLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDIVGWVDDRTLLLTGKRNAANR EEEEEECCCCCCCHHHHHEEEEEHHHCCCCEEEEEECCEEEEEECCCEEEEECCCCCCCC DRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPR CCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCC RLDTFGAYRWRDAEHLLLIPLQPDGSSHLLREYDLRTHTWRTLGDLGDQVRQGDWSVSPD CHHHCCCEEECCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC GRHLAYLSARDGNVRVVALP CCEEEEEEECCCCEEEEEEC >Mature Secondary Structure MEGMSALVFVLGASALAATLPSKAVLSGTCCPGAEWTPDSRALLFLDGPPARGSTGIYQV CCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEE SAEGGPVTRRFSSVAFYSPRLLWAVRPGTGVNTTLERLVDGRKFTLPTYGADVSWNRAET ECCCCCCHHHHCEEEEECCEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCE RLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDIVGWVDDRTLLLTGKRNAANR EEEEEECCCCCCCHHHHHEEEEEHHHCCCCEEEEEECCEEEEEECCCEEEEECCCCCCCC DRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPR CCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCC RLDTFGAYRWRDAEHLLLIPLQPDGSSHLLREYDLRTHTWRTLGDLGDQVRQGDWSVSPD CHHHCCCEEECCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC GRHLAYLSARDGNVRVVALP CCEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA