Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94985884

Identifier: 94985884

GI number: 94985884

Start: 1899216

End: 1900274

Strand: Reverse

Name: 94985884

Synonym: Dgeo_1784

Alternate gene names: NA

Gene position: 1900274-1899216 (Counterclockwise)

Preceding gene: 94985888

Following gene: 94985883

Centisome position: 77.02

GC content: 60.06

Gene sequence:

>1059_bases
ATGAAAGACACCCGGAGCCGACCCGCTCAGTCTAGCCTCACTGCCCTGCTTGCTGAGCACTTCCCGCTGGATCCTCGTCG
CCTGACCGTCTTGAGCGCCCTGATCTTGGCCGTGATTCAGGCACGAAGCGTCGTTCTTTACCAGCTCGTCCAGATCGTTG
ACCTTCCCGGCTCAAACGACACCGTGTACCAACGCCTGAAGCGCTTCGTGCAATTCGCACTTCCTGATCTCCTGGTTGCC
CGCTTCGTCCTGGCCCATCTGCGAGACGAGCAGCATCTGCTGCTCGTCCTGGACCGCACCAATTGGAAGCTCGGTCAGCA
GGACATCAATATTCTCCTGCTCAGTGTGCGGTGGCAGACCTTCAGTTTCCCGCTCGTCTGGACCTTGTTGCCGCATAGCG
GCAACAGCAACATGGCGACCCGCATCGCGCTGGTCGAACGCCTGCTCCCATTGCTCCAGGGCAAGACACTCTTCCTGGCC
GCTGACCGAGAGTTCGTCGGTGGGGAGTGGTTCGTGGCCTTGCGCCGCATGAGCCTTTCTCCCGTGATCCGTTTGCGGGC
TGACAGCATGGTCGAGGGGTCCCCAGTCTGGGTCAGATTCAAGAAACTCAAGCCGGGTGAAGTGCGGGTCTGGTACAAGC
CCACTCACGTCTACGGCGTGACGCTGCGCGTTCTAGCGTGCCAGAACGTCCACGGCCAGACTCTCTTCCTGGCTTACCAA
GGCCATGCTGAAAAAGCCCTGAAACGTTACGCGCTGCGCTGGACAGCAGAAAACATGCATCAGGCGCTGAAATCCAGGGG
CTTTTTTCTCGAAAGCACTCACCTGACTGATCCCAGTCGGGTTTCCACGCTCCTGGCCGTGGTCGCACTGGCCTTTGTAT
GGTGCTGTTTAGTGGGAGAGTTTGAGCAGCAGCGTGACCCGTCACGCTGCCTCAGGCACGGCTATCCCCCCAAAAGCCTC
TTCAGACGTGGCCTGGATGCCCTTCGCGCCGTGCTGACCAAGCCCAACCGTGGGGCTGCACGCGCGTTTCCCGACTTTCT
CGCCACTTTTGACCCCTAG

Upstream 100 bases:

>100_bases
CCAGGCAGGTGTCAGAGGACTTAGGAGGACAGAGTGCTCTCTAGGGGTCAAAACTCAGATGGAGACTTGAGAAGTCGGCT
CCTGTACGGTGTTTTCTGCG

Downstream 100 bases:

>100_bases
AGAGGACAGAGTGGTCTGGGCGCAGTTCTCGAACCCCAGCTTCTCGAAGACGAGCTGAGGCCATTGGCTACACTGCCCTC
GTTAGTGTAAGTTCGTGTGA

Product: transposase, IS4

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Subunit; Tn10-Like Transposase

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKDTRSRPAQSSLTALLAEHFPLDPRRLTVLSALILAVIQARSVVLYQLVQIVDLPGSNDTVYQRLKRFVQFALPDLLVA
RFVLAHLRDEQHLLLVLDRTNWKLGQQDINILLLSVRWQTFSFPLVWTLLPHSGNSNMATRIALVERLLPLLQGKTLFLA
ADREFVGGEWFVALRRMSLSPVIRLRADSMVEGSPVWVRFKKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQ
GHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRHGYPPKSL
FRRGLDALRAVLTKPNRGAARAFPDFLATFDP

Sequences:

>Translated_352_residues
MKDTRSRPAQSSLTALLAEHFPLDPRRLTVLSALILAVIQARSVVLYQLVQIVDLPGSNDTVYQRLKRFVQFALPDLLVA
RFVLAHLRDEQHLLLVLDRTNWKLGQQDINILLLSVRWQTFSFPLVWTLLPHSGNSNMATRIALVERLLPLLQGKTLFLA
ADREFVGGEWFVALRRMSLSPVIRLRADSMVEGSPVWVRFKKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQ
GHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRHGYPPKSL
FRRGLDALRAVLTKPNRGAARAFPDFLATFDP
>Mature_352_residues
MKDTRSRPAQSSLTALLAEHFPLDPRRLTVLSALILAVIQARSVVLYQLVQIVDLPGSNDTVYQRLKRFVQFALPDLLVA
RFVLAHLRDEQHLLLVLDRTNWKLGQQDINILLLSVRWQTFSFPLVWTLLPHSGNSNMATRIALVERLLPLLQGKTLFLA
ADREFVGGEWFVALRRMSLSPVIRLRADSMVEGSPVWVRFKKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQ
GHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGEFEQQRDPSRCLRHGYPPKSL
FRRGLDALRAVLTKPNRGAARAFPDFLATFDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40125; Mature: 40125

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTRSRPAQSSLTALLAEHFPLDPRRLTVLSALILAVIQARSVVLYQLVQIVDLPGSND
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVYQRLKRFVQFALPDLLVARFVLAHLRDEQHLLLVLDRTNWKLGQQDINILLLSVRWQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECE
FSFPLVWTLLPHSGNSNMATRIALVERLLPLLQGKTLFLAADREFVGGEWFVALRRMSLS
ECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCC
PVIRLRADSMVEGSPVWVRFKKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQ
HHEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEHHEEEEEEECCCCCCEEEEEEC
GHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKDTRSRPAQSSLTALLAEHFPLDPRRLTVLSALILAVIQARSVVLYQLVQIVDLPGSND
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVYQRLKRFVQFALPDLLVARFVLAHLRDEQHLLLVLDRTNWKLGQQDINILLLSVRWQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECE
FSFPLVWTLLPHSGNSNMATRIALVERLLPLLQGKTLFLAADREFVGGEWFVALRRMSLS
ECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCC
PVIRLRADSMVEGSPVWVRFKKLKPGEVRVWYKPTHVYGVTLRVLACQNVHGQTLFLAYQ
HHEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCEEEHHEEEEEEECCCCCCEEEEEEC
GHAEKALKRYALRWTAENMHQALKSRGFFLESTHLTDPSRVSTLLAVVALAFVWCCLVGE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FEQQRDPSRCLRHGYPPKSLFRRGLDALRAVLTKPNRGAARAFPDFLATFDP
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA