| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985866
Identifier: 94985866
GI number: 94985866
Start: 1878843
End: 1880003
Strand: Reverse
Name: 94985866
Synonym: Dgeo_1766
Alternate gene names: NA
Gene position: 1880003-1878843 (Counterclockwise)
Preceding gene: 94985870
Following gene: 94985861
Centisome position: 76.2
GC content: 73.21
Gene sequence:
>1161_bases ATGCCTGGCATGACGAGGCAGGGCGGGCAGGTCTGGGCACATGTTGGGCAGGCGTTCCGGGAGACGGCCTATGACGTGGT GGTCGTCGGGGCGGGACGGATGGGCAGCGCCTGTGCGCTCTTTTTGCGGCAGCTCGCGCCGGATGTGCGCCTGCTGCTTG TCGAGCGGGGCGGCCTGCCGAACGAGGAAGGCGCGACCATCCTTGCGCCGGGGGTGTGGACCGCGCTGGACGTGCCTGCG GGCCGCGAGCGGGAGGCCGCCTGGGTGCGGCGGGCGTTGGCGCACGACTTCGGAAACGTCACGTTTGGGCCGCGCCCTCT GCTCGACCTGCACGCGGAGGAGGGAGAAGGCCGCCTCCCCAGCGCGGACCTCCTGGCCCAGTTCCCCGAGGCCGCCGGGC TGTTTGATCCCGCCGCCCTTCCCTTTGCGCGGGTGGACCTGGAGGCCGCGACCTACCGGCCCGGCGCCGTCGCGCTCGCC TGCGGGCAGAGGGCGGTGCGAGCGGGGGCCGACCTGCTGCTGAATACCCACGCGCACCTCACGCCGGGCGGGGTGAGGCT TGACCGCCTGACCGTCACGAACACGCACCAGATCGTCACGCACGAGACGCACGAGCTGCACGCAGGCTTGGTTGTGGTGG CGATGGGCGCGGACGGTCCGCACGCCGCCGAGCACGAGCTGGGCCTCCACACGACGCATGGCCGAGCGTACCGCCAGCTT CCCCGACTGAACACGCCCAGTACCGACCACACGCCCACCCTCCGCGCGGGCGGCCTGATCCTGCGCCCGCAGCACGGCGG CTTCACGCTTGTTCCTCCCATTCATCACCGCGACCCGCACGGCTACCGGCCCACTGGGGGCCGCCTGACCGGAGTGCCCG TGGGTGTGCGCCGCGAGACGCTTGAGGATCTGCTTCGGCTGATGGCCGCCCTGCCGCCCCTGGCGACGGAGGCGCTGGAG GTTGGCCACAGCCTGGCGGATGTGCCGGGCGCGTGGCTCGCCCTGCCTGAGGGCCGAGCTGACACGCCGCCCTGCCACCA GCACCTCACGGAGGGCGTGCACCTCCTCCTCGGCGGTCCGCTGGCCGATCCGCTCGGCCTGGCGGTGGCCTACGATCTGG CGGCGCGGGTGGCGGGCGTGGGGGAGAGGCCCTGGGCGTGA
Upstream 100 bases:
>100_bases CGGCGGCCTCTGTATGGGGTCTGACAGGAAGGTGAGAGGGAACAGCTTTGGGGCCAGTGGCGGATGGTCGGCCCGCCGTT CCCGGTCTCTACGCGGCATC
Downstream 100 bases:
>100_bases GGAGGTCACCATATCCCTCACCCGCTCGCGTTTTCCCCTGTCTCGCCGAGCAAGCGGGCGCGCTCCTCTGGGGTGAGCGC CTCCATCACGCGGCGCAGCA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MPGMTRQGGQVWAHVGQAFRETAYDVVVVGAGRMGSACALFLRQLAPDVRLLLVERGGLPNEEGATILAPGVWTALDVPA GREREAAWVRRALAHDFGNVTFGPRPLLDLHAEEGEGRLPSADLLAQFPEAAGLFDPAALPFARVDLEAATYRPGAVALA CGQRAVRAGADLLLNTHAHLTPGGVRLDRLTVTNTHQIVTHETHELHAGLVVVAMGADGPHAAEHELGLHTTHGRAYRQL PRLNTPSTDHTPTLRAGGLILRPQHGGFTLVPPIHHRDPHGYRPTGGRLTGVPVGVRRETLEDLLRLMAALPPLATEALE VGHSLADVPGAWLALPEGRADTPPCHQHLTEGVHLLLGGPLADPLGLAVAYDLAARVAGVGERPWA
Sequences:
>Translated_386_residues MPGMTRQGGQVWAHVGQAFRETAYDVVVVGAGRMGSACALFLRQLAPDVRLLLVERGGLPNEEGATILAPGVWTALDVPA GREREAAWVRRALAHDFGNVTFGPRPLLDLHAEEGEGRLPSADLLAQFPEAAGLFDPAALPFARVDLEAATYRPGAVALA CGQRAVRAGADLLLNTHAHLTPGGVRLDRLTVTNTHQIVTHETHELHAGLVVVAMGADGPHAAEHELGLHTTHGRAYRQL PRLNTPSTDHTPTLRAGGLILRPQHGGFTLVPPIHHRDPHGYRPTGGRLTGVPVGVRRETLEDLLRLMAALPPLATEALE VGHSLADVPGAWLALPEGRADTPPCHQHLTEGVHLLLGGPLADPLGLAVAYDLAARVAGVGERPWA >Mature_385_residues PGMTRQGGQVWAHVGQAFRETAYDVVVVGAGRMGSACALFLRQLAPDVRLLLVERGGLPNEEGATILAPGVWTALDVPAG REREAAWVRRALAHDFGNVTFGPRPLLDLHAEEGEGRLPSADLLAQFPEAAGLFDPAALPFARVDLEAATYRPGAVALAC GQRAVRAGADLLLNTHAHLTPGGVRLDRLTVTNTHQIVTHETHELHAGLVVVAMGADGPHAAEHELGLHTTHGRAYRQLP RLNTPSTDHTPTLRAGGLILRPQHGGFTLVPPIHHRDPHGYRPTGGRLTGVPVGVRRETLEDLLRLMAALPPLATEALEV GHSLADVPGAWLALPEGRADTPPCHQHLTEGVHLLLGGPLADPLGLAVAYDLAARVAGVGERPWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40927; Mature: 40796
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGMTRQGGQVWAHVGQAFRETAYDVVVVGAGRMGSACALFLRQLAPDVRLLLVERGGLP CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC NEEGATILAPGVWTALDVPAGREREAAWVRRALAHDFGNVTFGPRPLLDLHAEEGEGRLP CCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC SADLLAQFPEAAGLFDPAALPFARVDLEAATYRPGAVALACGQRAVRAGADLLLNTHAHL CHHHHHHCHHHCCCCCCCCCCEEEEECHHHCCCCCEEEEHHCHHHHHCCCCEEEECCCEE TPGGVRLDRLTVTNTHQIVTHETHELHAGLVVVAMGADGPHAAEHELGLHTTHGRAYRQL CCCCEEEEEEEECCCEEEEECCCHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHC PRLNTPSTDHTPTLRAGGLILRPQHGGFTLVPPIHHRDPHGYRPTGGRLTGVPVGVRRET CCCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHH LEDLLRLMAALPPLATEALEVGHSLADVPGAWLALPEGRADTPPCHQHLTEGVHLLLGGP HHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCEEECCCCCCCCCHHHHHHHHCEEEEECCC LADPLGLAVAYDLAARVAGVGERPWA CCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGMTRQGGQVWAHVGQAFRETAYDVVVVGAGRMGSACALFLRQLAPDVRLLLVERGGLP CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC NEEGATILAPGVWTALDVPAGREREAAWVRRALAHDFGNVTFGPRPLLDLHAEEGEGRLP CCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC SADLLAQFPEAAGLFDPAALPFARVDLEAATYRPGAVALACGQRAVRAGADLLLNTHAHL CHHHHHHCHHHCCCCCCCCCCEEEEECHHHCCCCCEEEEHHCHHHHHCCCCEEEECCCEE TPGGVRLDRLTVTNTHQIVTHETHELHAGLVVVAMGADGPHAAEHELGLHTTHGRAYRQL CCCCEEEEEEEECCCEEEEECCCHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCHHHHHC PRLNTPSTDHTPTLRAGGLILRPQHGGFTLVPPIHHRDPHGYRPTGGRLTGVPVGVRRET CCCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHH LEDLLRLMAALPPLATEALEVGHSLADVPGAWLALPEGRADTPPCHQHLTEGVHLLLGGP HHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCEEECCCCCCCCCHHHHHHHHCEEEEECCC LADPLGLAVAYDLAARVAGVGERPWA CCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA