| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985857
Identifier: 94985857
GI number: 94985857
Start: 1867280
End: 1869007
Strand: Reverse
Name: 94985857
Synonym: Dgeo_1757
Alternate gene names: NA
Gene position: 1869007-1867280 (Counterclockwise)
Preceding gene: 94985859
Following gene: 94985856
Centisome position: 75.75
GC content: 65.28
Gene sequence:
>1728_bases ATGAAGAGATTTTCCGCTGGCCGCCGTCCCCCTGTTCGCCGTTCTGCTGTCTGGCTGGGCTTCTTGACCGTTACACTGGG GCTGACGCTGAGCGCCTGTGGTGGGAGTGGGGATACGCCGCCCGCGACGTCCGCCGACACACGGGTCACCCCCCTCCCCG GCGCCGTGCAGCTGGACTGGCACAGGCAAGTTCCGCTGCCCTTTGCTCACCGGCAGCCGATTGACCCGGCCCAGCTTCTG CCGCCGCTGGCGGACCTTGCGCTGGAAACGCCAGAGACGCTGACCAACGCGCCTCGCCGGACGGTGCGGGTGTACTACAG TGACCCTCTGCCCGCCAGTTCTCCCTACCGTGACGGCGGTTCCTTCCACGCTCTGATGCTCCGGAATCTGCTTGGCCAAT ACGCGAATGTGGATGTGGAGCTGCGCCCCATCTCACAGTATCAAGCGGGAGCAGCCCTGAGCAGCCGGCGCACCTTTTAC ATCGGTACCGTGTATGACGAGCCGATTCCGGCTGCGTTCCTCGACGACGTGAAGGCGGGCGCACCCGTGACCTGGATCGG CTACAACCTCTGGGAATTGGGAAGTGGCCTCGAGGGGCTGGGCCTGAGTTACCGCAAGCTGCACACCGCCCTCACGCCCG AGCAGATCGCAGCGACCTTTACCACCGTCGAGTACAAGAATTACGCTTACCACAAGTACCCGGCGCCGATGGAGATCAAC GAGGTCGCGGCTGACCCGGCCCGCACCCGGACCCTCGCCCTTGCCCGTGACGCGGCGGGTGACCGCATTCCCTATCTGGT CCAGAGCGGCAACTTCTACTACGTGGCCGACAACCCCTTCCAGTACATCACTCCCACTGACCGCTATCTGGTGATGGCCG ACAGCCTGGGGACCATGCTGGGGGATACCAGCGCGGCAACCTGCCGCAAGCAGGCGATCCTGCGGCTGGAAGACATCAGC CCCACCGGCAACCCCGAGGGGCTACGCACCATGCTGGACGTGATTCAGGACTTGCGGATACCGTTCGCCCTCACGGTGAT TCCCGAAGCCTACTACCAGGGCGTGAAGTACGACTGGAAGGCGAACGGGGGCGAACTGCTGCAGCTGTACCGGGCAGCGG CGCTGGGGGGTGCGGTGATCCAGCACGGCTACACCCACAACTATCACGGGCTCAAGACCCCGGAGGGCGATTCCGGCGAC GCCTGGGAGTTCTGGGACAAGGAAGCCGAACGCCCCCTGGCGGCCCTGACGCCCGAGGCCGCCGAGAGCCGGGTGCAGGC CGGGCGGCAGATTCTGCTGGGCCTGGGGGTGCGGCCCCAGACCTGGACCACCCCCCACTACGAGGCGGACACGCCGCTGT ATCCGGTGTTTAACCGGGTCTACCCCTCGGCGCTCGAACGGCGCATGTATCAGGTGGACGGCGTGCGCGCGGGCCAGTTC TTCCCGTATCCGGTGCGCGACGCCTACGGCACCCTGGTGCTGCCAGAAAATCTCGGCAATATCCAGGAGGGCTACCTGGC AGACGCGGTGCTGGAGGCAGCCGAGGCCAACCGCAATCTCGCCTGCCCCTACGCCAGTCTGTTTGTGCACCCCTACCTGG TCGAGAGTGACTATACCGGTCCCGACCGCTTGAGCAAGGCTGACTTCCGCAAGCTGATCACCGACATCCAGGCCAAGGGG TATACCTTCGTCAATCCCCTGAACCTCACCCTGCGCGTCCTTCCTTGA
Upstream 100 bases:
>100_bases TCCGGCGAGTCGAGGTCCCGGCCTTGGCGCGAGCGTCTTCCCGACACGCATGGAGAGCCGGTGTCTTCCGGCTGTTCTCG GTTCCCGAGGTAGGTGAGGC
Downstream 100 bases:
>100_bases GCGGTGGACTGATATGAGCCGTCCATCTTGTTTGGAGACCTGGCGCCGGGTCTGGACGCTCGCTCTGTTGCTGGGCGGTG GGGCGCTCCCTGCCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MKRFSAGRRPPVRRSAVWLGFLTVTLGLTLSACGGSGDTPPATSADTRVTPLPGAVQLDWHRQVPLPFAHRQPIDPAQLL PPLADLALETPETLTNAPRRTVRVYYSDPLPASSPYRDGGSFHALMLRNLLGQYANVDVELRPISQYQAGAALSSRRTFY IGTVYDEPIPAAFLDDVKAGAPVTWIGYNLWELGSGLEGLGLSYRKLHTALTPEQIAATFTTVEYKNYAYHKYPAPMEIN EVAADPARTRTLALARDAAGDRIPYLVQSGNFYYVADNPFQYITPTDRYLVMADSLGTMLGDTSAATCRKQAILRLEDIS PTGNPEGLRTMLDVIQDLRIPFALTVIPEAYYQGVKYDWKANGGELLQLYRAAALGGAVIQHGYTHNYHGLKTPEGDSGD AWEFWDKEAERPLAALTPEAAESRVQAGRQILLGLGVRPQTWTTPHYEADTPLYPVFNRVYPSALERRMYQVDGVRAGQF FPYPVRDAYGTLVLPENLGNIQEGYLADAVLEAAEANRNLACPYASLFVHPYLVESDYTGPDRLSKADFRKLITDIQAKG YTFVNPLNLTLRVLP
Sequences:
>Translated_575_residues MKRFSAGRRPPVRRSAVWLGFLTVTLGLTLSACGGSGDTPPATSADTRVTPLPGAVQLDWHRQVPLPFAHRQPIDPAQLL PPLADLALETPETLTNAPRRTVRVYYSDPLPASSPYRDGGSFHALMLRNLLGQYANVDVELRPISQYQAGAALSSRRTFY IGTVYDEPIPAAFLDDVKAGAPVTWIGYNLWELGSGLEGLGLSYRKLHTALTPEQIAATFTTVEYKNYAYHKYPAPMEIN EVAADPARTRTLALARDAAGDRIPYLVQSGNFYYVADNPFQYITPTDRYLVMADSLGTMLGDTSAATCRKQAILRLEDIS PTGNPEGLRTMLDVIQDLRIPFALTVIPEAYYQGVKYDWKANGGELLQLYRAAALGGAVIQHGYTHNYHGLKTPEGDSGD AWEFWDKEAERPLAALTPEAAESRVQAGRQILLGLGVRPQTWTTPHYEADTPLYPVFNRVYPSALERRMYQVDGVRAGQF FPYPVRDAYGTLVLPENLGNIQEGYLADAVLEAAEANRNLACPYASLFVHPYLVESDYTGPDRLSKADFRKLITDIQAKG YTFVNPLNLTLRVLP >Mature_575_residues MKRFSAGRRPPVRRSAVWLGFLTVTLGLTLSACGGSGDTPPATSADTRVTPLPGAVQLDWHRQVPLPFAHRQPIDPAQLL PPLADLALETPETLTNAPRRTVRVYYSDPLPASSPYRDGGSFHALMLRNLLGQYANVDVELRPISQYQAGAALSSRRTFY IGTVYDEPIPAAFLDDVKAGAPVTWIGYNLWELGSGLEGLGLSYRKLHTALTPEQIAATFTTVEYKNYAYHKYPAPMEIN EVAADPARTRTLALARDAAGDRIPYLVQSGNFYYVADNPFQYITPTDRYLVMADSLGTMLGDTSAATCRKQAILRLEDIS PTGNPEGLRTMLDVIQDLRIPFALTVIPEAYYQGVKYDWKANGGELLQLYRAAALGGAVIQHGYTHNYHGLKTPEGDSGD AWEFWDKEAERPLAALTPEAAESRVQAGRQILLGLGVRPQTWTTPHYEADTPLYPVFNRVYPSALERRMYQVDGVRAGQF FPYPVRDAYGTLVLPENLGNIQEGYLADAVLEAAEANRNLACPYASLFVHPYLVESDYTGPDRLSKADFRKLITDIQAKG YTFVNPLNLTLRVLP
Specific function: Unknown
COG id: COG5298
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63563; Mature: 63563
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFSAGRRPPVRRSAVWLGFLTVTLGLTLSACGGSGDTPPATSADTRVTPLPGAVQLDW CCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCEECCCCCCEEECC HRQVPLPFAHRQPIDPAQLLPPLADLALETPETLTNAPRRTVRVYYSDPLPASSPYRDGG CCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCC SFHALMLRNLLGQYANVDVELRPISQYQAGAALSSRRTFYIGTVYDEPIPAAFLDDVKAG CHHHHHHHHHHHHHHCCCEEEEECCHHHCCCHHCCCCEEEEEEEECCCCCHHHHHHHCCC APVTWIGYNLWELGSGLEGLGLSYRKLHTALTPEQIAATFTTVEYKNYAYHKYPAPMEIN CCEEEECCCHHHHCCCCCCCCCHHHHHHHHCCHHHHHHEEEEEEECCCEEECCCCCCCHH EVAADPARTRTLALARDAAGDRIPYLVQSGNFYYVADNPFQYITPTDRYLVMADSLGTML HHHCCCHHHHEEEEEHHCCCCCCCEEEECCCEEEEECCCEEEECCCCCEEEEECHHHHHH GDTSAATCRKQAILRLEDISPTGNPEGLRTMLDVIQDLRIPFALTVIPEAYYQGVKYDWK CCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCEEEC ANGGELLQLYRAAALGGAVIQHGYTHNYHGLKTPEGDSGDAWEFWDKEAERPLAALTPEA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCHH AESRVQAGRQILLGLGVRPQTWTTPHYEADTPLYPVFNRVYPSALERRMYQVDGVRAGQF HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC FPYPVRDAYGTLVLPENLGNIQEGYLADAVLEAAEANRNLACPYASLFVHPYLVESDYTG CCCCHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCC PDRLSKADFRKLITDIQAKGYTFVNPLNLTLRVLP HHHCCHHHHHHHHHHHHHCCEEEEECCEEEEEECC >Mature Secondary Structure MKRFSAGRRPPVRRSAVWLGFLTVTLGLTLSACGGSGDTPPATSADTRVTPLPGAVQLDW CCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCEECCCCCCEEECC HRQVPLPFAHRQPIDPAQLLPPLADLALETPETLTNAPRRTVRVYYSDPLPASSPYRDGG CCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCC SFHALMLRNLLGQYANVDVELRPISQYQAGAALSSRRTFYIGTVYDEPIPAAFLDDVKAG CHHHHHHHHHHHHHHCCCEEEEECCHHHCCCHHCCCCEEEEEEEECCCCCHHHHHHHCCC APVTWIGYNLWELGSGLEGLGLSYRKLHTALTPEQIAATFTTVEYKNYAYHKYPAPMEIN CCEEEECCCHHHHCCCCCCCCCHHHHHHHHCCHHHHHHEEEEEEECCCEEECCCCCCCHH EVAADPARTRTLALARDAAGDRIPYLVQSGNFYYVADNPFQYITPTDRYLVMADSLGTML HHHCCCHHHHEEEEEHHCCCCCCCEEEECCCEEEEECCCEEEECCCCCEEEEECHHHHHH GDTSAATCRKQAILRLEDISPTGNPEGLRTMLDVIQDLRIPFALTVIPEAYYQGVKYDWK CCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCEEEC ANGGELLQLYRAAALGGAVIQHGYTHNYHGLKTPEGDSGDAWEFWDKEAERPLAALTPEA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCHH AESRVQAGRQILLGLGVRPQTWTTPHYEADTPLYPVFNRVYPSALERRMYQVDGVRAGQF HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC FPYPVRDAYGTLVLPENLGNIQEGYLADAVLEAAEANRNLACPYASLFVHPYLVESDYTG CCCCHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCC PDRLSKADFRKLITDIQAKGYTFVNPLNLTLRVLP HHHCCHHHHHHHHHHHHHCCEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA