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The map label for this gene is nfrB [H]

Identifier: 94985855

GI number: 94985855

Start: 1864188

End: 1866200

Strand: Reverse

Name: nfrB [H]

Synonym: Dgeo_1755

Alternate gene names: 94985855

Gene position: 1866200-1864188 (Counterclockwise)

Preceding gene: 94985856

Following gene: 94985854

Centisome position: 75.64

GC content: 66.72

Gene sequence:

>2013_bases
ATGCACCTTGACCCCGGCACCCTGGCCTTGCTGCTGCTCACTACCCTGCTGCTGCTCCTTTACCTGGTTGTCGCGCTCGA
TGATCTGCTGCTCGACCTGGCGTATCTGCTGCTGCGCCGCCGTATTCACAGCTGGCGACTGCGGCCAGCCGACCTTCAGC
AGGATCATCCTTCGCATCTCGCGGTGATGATCGGGGCCTGGCAGGAGGCGGGCGTGGTGACGCCGATGATCGAGAGCACC
CTGCGGCTGATGCACTATCCCGCCAGCCGTGTGGAATTTTTTGTGGGTGTCTATCCCAACGACCTCGCCACCCTGCCGGA
GGTGCAGGCCCTGGCCGAGCGGTTTCCCAACGTTCACTGCGTTGTCAACGAGCGGCCTGGCCCAACCAGCAAGAGCCAGA
ACCTCAACGGGGTGTATGCCGCCATCAAGGCGCACGAGGCCCGCACCGGAAAGCCTTTCGACGTGATCGCTGTCCACGAC
GCCGAGGACGTGATTCACCCCTATACCTTTCAGCTCTACAGCACGCTGCTCAAGCGCTGGAAGATGGTGCAGCTCCCCGT
GTTTGCGCTGTTTCCGCGGGGCCGCGCGTGGGGTGCCGGGCTGCGCGGCCTGCTGCGGCACCTCACCGGACAGATCGTGA
CCGGCAGCTATGCCGACGAGTTCGCCGAGCATCACCTGCGCCACCTGCCCGCGCGTGAGGCCCTGGGCCTGTTCCTTCCC
AGTGCAGGTACCGGCTTTGCCATGCGCCGCGAGGTAATGGCTCTGCTCGAGGAGGATGGTCAGGTGCTCACCGAGGGCGC
GCTGGCCGAGGACTACGAACTCGCCCTGCGGCTGTGGCGCCGGGGCGTGCGCGTGCACTTCCATGTTCAGCCGCTGCCAC
GCCTGGACACCCAGGGCAAGCTGGGGCGGGACTACGTGGCGGTCCGCGAGTATTTCCCAACGGAGGTCCAGGCCGCCATC
CGCCAGAAGGGCCGCTGGACCTACGGCATTACCCTCCAGACCCCACACCGCCTGCGCGGCCTGCGGCTGAACCTGCGCGA
CCGGCTGACGCTCTGGCACGACCAGAAGGGCAAGTACACCAACCTCATTCACCTGCTGGGCTATCCCTTGAGTCTGACGC
TGCTGCTCGCGCCGCTGTTTGGGTTTCACCTGCAGTCCAACTCGCTCACACGAGACCTGCTGCTGGGGGTGCTGGGGGTC
ACCGGCTGGCGCATGCTGATGCGGGCCGGTGCGGTGGGGCGCATCTACGGGCTGCGGCAGGCGCTGATCGCGACCCTGTG
CCTGCCGGGTCTTCCGCTGCGCTGGCTGGCGGGAAACGTCATCAACACCTTGGCGACACTCCGGGCCTGGCGGCTGTTTT
TGTTTCCGGAGCGGGGTCAGAAACGCGGTACCGCCCGCTGGGACAAGACCGAGCGCAAGGCCTATGTGCCGGACGAGGTG
TTGCAGGCCGTCCGCCGCCGTCTGGGGGATCAGTGGCTCTTTACAGGCGCGCTGCGTGAACGTGAACTGGCCCGGTTGCT
GCGGGTGCAGCGCCGCGCCGCCGCACGCCTCGGTCAGCTTGCCGTCCAGCAGGCGCTGGTGGATGAGGCCCAGGTGCGCC
GCAGCCTCGCCCAGACCCAGGGCCTGATGTACCTGAACCTGACGCCAGAGATGCTCGATCACCGCTTTCTGAGCGCCGAG
CAGGCCCAACGACTCGATGTCGCCATTCTGGGAAAGCGGGGTGATCGGCTGCTCGTGGCCTCGCCGCACGCTGTGAGTCC
TGAGCGCTGCGAGGCGCTGCTGCGCGAGCTGCGGTTCTGTCTGAGAGCGCCCGAGCTGCCGATCACGGTCTATGCCACCT
CTCGTCAGAGCCTGCGTGCGGCCTACCGCCGCCCCGGTCTTCGCACCGCGGCCTACCACCAGCTTGTGCGCGACGAACGC
ATTCCGCTCGACATGCTTCCCTACGAGTTCGAGCGCCTGACACGGCAGTACATCGCTCCGTATGGCGCTCATCCCCGCCA
CTGGGCGGCGTAA

Upstream 100 bases:

>100_bases
GCGCTGGCAGCGGTGTTTCGCCGCTCCCTCGGACATCCCTGTATCCGGACCACCCTCGATCTCACGCCTGACTTTCCCAC
CCCTGCCCCACGGAGTCCCC

Downstream 100 bases:

>100_bases
ACCGGGCAGGACCGCGCCGGGTTTGTGCTGAAAGGACGAAGACCGGGCGCCCGGATGAGGGACAGAGGCTCATTTTTCAC
GCTTGCTACCCGCGGATGTG

Product: bacteriophage N4 adsorption protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MHLDPGTLALLLLTTLLLLLYLVVALDDLLLDLAYLLLRRRIHSWRLRPADLQQDHPSHLAVMIGAWQEAGVVTPMIEST
LRLMHYPASRVEFFVGVYPNDLATLPEVQALAERFPNVHCVVNERPGPTSKSQNLNGVYAAIKAHEARTGKPFDVIAVHD
AEDVIHPYTFQLYSTLLKRWKMVQLPVFALFPRGRAWGAGLRGLLRHLTGQIVTGSYADEFAEHHLRHLPAREALGLFLP
SAGTGFAMRREVMALLEEDGQVLTEGALAEDYELALRLWRRGVRVHFHVQPLPRLDTQGKLGRDYVAVREYFPTEVQAAI
RQKGRWTYGITLQTPHRLRGLRLNLRDRLTLWHDQKGKYTNLIHLLGYPLSLTLLLAPLFGFHLQSNSLTRDLLLGVLGV
TGWRMLMRAGAVGRIYGLRQALIATLCLPGLPLRWLAGNVINTLATLRAWRLFLFPERGQKRGTARWDKTERKAYVPDEV
LQAVRRRLGDQWLFTGALRERELARLLRVQRRAAARLGQLAVQQALVDEAQVRRSLAQTQGLMYLNLTPEMLDHRFLSAE
QAQRLDVAILGKRGDRLLVASPHAVSPERCEALLRELRFCLRAPELPITVYATSRQSLRAAYRRPGLRTAAYHQLVRDER
IPLDMLPYEFERLTRQYIAPYGAHPRHWAA

Sequences:

>Translated_670_residues
MHLDPGTLALLLLTTLLLLLYLVVALDDLLLDLAYLLLRRRIHSWRLRPADLQQDHPSHLAVMIGAWQEAGVVTPMIEST
LRLMHYPASRVEFFVGVYPNDLATLPEVQALAERFPNVHCVVNERPGPTSKSQNLNGVYAAIKAHEARTGKPFDVIAVHD
AEDVIHPYTFQLYSTLLKRWKMVQLPVFALFPRGRAWGAGLRGLLRHLTGQIVTGSYADEFAEHHLRHLPAREALGLFLP
SAGTGFAMRREVMALLEEDGQVLTEGALAEDYELALRLWRRGVRVHFHVQPLPRLDTQGKLGRDYVAVREYFPTEVQAAI
RQKGRWTYGITLQTPHRLRGLRLNLRDRLTLWHDQKGKYTNLIHLLGYPLSLTLLLAPLFGFHLQSNSLTRDLLLGVLGV
TGWRMLMRAGAVGRIYGLRQALIATLCLPGLPLRWLAGNVINTLATLRAWRLFLFPERGQKRGTARWDKTERKAYVPDEV
LQAVRRRLGDQWLFTGALRERELARLLRVQRRAAARLGQLAVQQALVDEAQVRRSLAQTQGLMYLNLTPEMLDHRFLSAE
QAQRLDVAILGKRGDRLLVASPHAVSPERCEALLRELRFCLRAPELPITVYATSRQSLRAAYRRPGLRTAAYHQLVRDER
IPLDMLPYEFERLTRQYIAPYGAHPRHWAA
>Mature_670_residues
MHLDPGTLALLLLTTLLLLLYLVVALDDLLLDLAYLLLRRRIHSWRLRPADLQQDHPSHLAVMIGAWQEAGVVTPMIEST
LRLMHYPASRVEFFVGVYPNDLATLPEVQALAERFPNVHCVVNERPGPTSKSQNLNGVYAAIKAHEARTGKPFDVIAVHD
AEDVIHPYTFQLYSTLLKRWKMVQLPVFALFPRGRAWGAGLRGLLRHLTGQIVTGSYADEFAEHHLRHLPAREALGLFLP
SAGTGFAMRREVMALLEEDGQVLTEGALAEDYELALRLWRRGVRVHFHVQPLPRLDTQGKLGRDYVAVREYFPTEVQAAI
RQKGRWTYGITLQTPHRLRGLRLNLRDRLTLWHDQKGKYTNLIHLLGYPLSLTLLLAPLFGFHLQSNSLTRDLLLGVLGV
TGWRMLMRAGAVGRIYGLRQALIATLCLPGLPLRWLAGNVINTLATLRAWRLFLFPERGQKRGTARWDKTERKAYVPDEV
LQAVRRRLGDQWLFTGALRERELARLLRVQRRAAARLGQLAVQQALVDEAQVRRSLAQTQGLMYLNLTPEMLDHRFLSAE
QAQRLDVAILGKRGDRLLVASPHAVSPERCEALLRELRFCLRAPELPITVYATSRQSLRAAYRRPGLRTAAYHQLVRDER
IPLDMLPYEFERLTRQYIAPYGAHPRHWAA

Specific function: Required for bacteriophage N4 adsorption. May be a component of the phage receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=623, Percent_Identity=32.2632423756019, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007831 [H]

Pfam domain/function: PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 76362; Mature: 76362

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDPGTLALLLLTTLLLLLYLVVALDDLLLDLAYLLLRRRIHSWRLRPADLQQDHPSHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
AVMIGAWQEAGVVTPMIESTLRLMHYPASRVEFFVGVYPNDLATLPEVQALAERFPNVHC
EEEEECHHHCCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCHHHHHHHHHCCCEEE
VVNERPGPTSKSQNLNGVYAAIKAHEARTGKPFDVIAVHDAEDVIHPYTFQLYSTLLKRW
EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCHHHHHHHHHHHHH
KMVQLPVFALFPRGRAWGAGLRGLLRHLTGQIVTGSYADEFAEHHLRHLPAREALGLFLP
HHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCHHHHHHHCCC
SAGTGFAMRREVMALLEEDGQVLTEGALAEDYELALRLWRRGVRVHFHVQPLPRLDTQGK
CCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
LGRDYVAVREYFPTEVQAAIRQKGRWTYGITLQTPHRLRGLRLNLRDRLTLWHDQKGKYT
CCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCHHHCCCEECHHHCEEEEECCCCCHH
NLIHLLGYPLSLTLLLAPLFGFHLQSNSLTRDLLLGVLGVTGWRMLMRAGAVGRIYGLRQ
HHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALIATLCLPGLPLRWLAGNVINTLATLRAWRLFLFPERGQKRGTARWDKTERKAYVPDEV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHH
LQAVRRRLGDQWLFTGALRERELARLLRVQRRAAARLGQLAVQQALVDEAQVRRSLAQTQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLMYLNLTPEMLDHRFLSAEQAQRLDVAILGKRGDRLLVASPHAVSPERCEALLRELRFC
CEEEEECCHHHHHHHHHCHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
LRAPELPITVYATSRQSLRAAYRRPGLRTAAYHQLVRDERIPLDMLPYEFERLTRQYIAP
HCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
YGAHPRHWAA
CCCCCCCCCC
>Mature Secondary Structure
MHLDPGTLALLLLTTLLLLLYLVVALDDLLLDLAYLLLRRRIHSWRLRPADLQQDHPSHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
AVMIGAWQEAGVVTPMIESTLRLMHYPASRVEFFVGVYPNDLATLPEVQALAERFPNVHC
EEEEECHHHCCCCHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCHHHHHHHHHCCCEEE
VVNERPGPTSKSQNLNGVYAAIKAHEARTGKPFDVIAVHDAEDVIHPYTFQLYSTLLKRW
EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCHHHHHHHHHHHHH
KMVQLPVFALFPRGRAWGAGLRGLLRHLTGQIVTGSYADEFAEHHLRHLPAREALGLFLP
HHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCHHHHHHHCCC
SAGTGFAMRREVMALLEEDGQVLTEGALAEDYELALRLWRRGVRVHFHVQPLPRLDTQGK
CCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
LGRDYVAVREYFPTEVQAAIRQKGRWTYGITLQTPHRLRGLRLNLRDRLTLWHDQKGKYT
CCCHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCHHHCCCEECHHHCEEEEECCCCCHH
NLIHLLGYPLSLTLLLAPLFGFHLQSNSLTRDLLLGVLGVTGWRMLMRAGAVGRIYGLRQ
HHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALIATLCLPGLPLRWLAGNVINTLATLRAWRLFLFPERGQKRGTARWDKTERKAYVPDEV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHH
LQAVRRRLGDQWLFTGALRERELARLLRVQRRAAARLGQLAVQQALVDEAQVRRSLAQTQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLMYLNLTPEMLDHRFLSAEQAQRLDVAILGKRGDRLLVASPHAVSPERCEALLRELRFC
CEEEEECCHHHHHHHHHCHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
LRAPELPITVYATSRQSLRAAYRRPGLRTAAYHQLVRDERIPLDMLPYEFERLTRQYIAP
HCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
YGAHPRHWAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]