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The map label for this gene is exbD [C]

Identifier: 94985853

GI number: 94985853

Start: 1862967

End: 1863383

Strand: Reverse

Name: exbD [C]

Synonym: Dgeo_1753

Alternate gene names: 94985853

Gene position: 1863383-1862967 (Counterclockwise)

Preceding gene: 94985854

Following gene: 94985852

Centisome position: 75.53

GC content: 66.67

Gene sequence:

>417_bases
GTGAAGCGGCGCTTCCGCGAGGGTGGGGACGGCGTGACCTTCGATTTTGCGCCGATGGTGGATGTCGTGCTGTTGCTGCT
GATCTTTTTCTTCCTGACGAGCAACCTAGGTGCGCGGCAAAATGCCCTGCCCCTCGATCTGCCACGTGCCAGCACCACCG
TACAGGAGACGCCCGCGCTGCCCATCGTCAGCGTGGACCGAGCCGGGAAACTCTATCTGAATGGCAAGGAAACCACGCTG
ACCCAGCTGGGAGCGCAGCTCAGGCCGCTGCTGCAGACCTCCGGCGGGGTGGTGGGCCTGCGGGCCGACGAGCGCGGCAG
CTACGGCACGGTTGTCCGGGTGATGGACGAGATCAAGCGTGCGGGCGGGGAGCGGCTGGCACTGGGCACCCGCAGCGCGC
AGAGCGGCGGAAAGTGA

Upstream 100 bases:

>100_bases
TGCCCGCCTGGCTCGCACCGCGCACCCTGACCCCGGCGGGGCGGTCCGTGCCGGAAGTGGCCCTGCACTTTGACAGCCTC
CCGACGGGTGGGGCGGCACG

Downstream 100 bases:

>100_bases
CGGTGCCGTGACCACGCTGCCCCCCTCTTCCCCCCTGCCCGAACAGCACAATCCCGAACGTCAGGAGCGCCTGCGAGCGG
CAGGTGTCACCTTGCTCCTG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKRRFREGGDGVTFDFAPMVDVVLLLLIFFFLTSNLGARQNALPLDLPRASTTVQETPALPIVSVDRAGKLYLNGKETTL
TQLGAQLRPLLQTSGGVVGLRADERGSYGTVVRVMDEIKRAGGERLALGTRSAQSGGK

Sequences:

>Translated_138_residues
MKRRFREGGDGVTFDFAPMVDVVLLLLIFFFLTSNLGARQNALPLDLPRASTTVQETPALPIVSVDRAGKLYLNGKETTL
TQLGAQLRPLLQTSGGVVGLRADERGSYGTVVRVMDEIKRAGGERLALGTRSAQSGGK
>Mature_138_residues
MKRRFREGGDGVTFDFAPMVDVVLLLLIFFFLTSNLGARQNALPLDLPRASTTVQETPALPIVSVDRAGKLYLNGKETTL
TQLGAQLRPLLQTSGGVVGLRADERGSYGTVVRVMDEIKRAGGERLALGTRSAQSGGK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14832; Mature: 14832

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRFREGGDGVTFDFAPMVDVVLLLLIFFFLTSNLGARQNALPLDLPRASTTVQETPAL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PIVSVDRAGKLYLNGKETTLTQLGAQLRPLLQTSGGVVGLRADERGSYGTVVRVMDEIKR
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
AGGERLALGTRSAQSGGK
CCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKRRFREGGDGVTFDFAPMVDVVLLLLIFFFLTSNLGARQNALPLDLPRASTTVQETPAL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PIVSVDRAGKLYLNGKETTLTQLGAQLRPLLQTSGGVVGLRADERGSYGTVVRVMDEIKR
CEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
AGGERLALGTRSAQSGGK
CCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]