| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985799
Identifier: 94985799
GI number: 94985799
Start: 1804578
End: 1805375
Strand: Reverse
Name: 94985799
Synonym: Dgeo_1699
Alternate gene names: NA
Gene position: 1805375-1804578 (Counterclockwise)
Preceding gene: 94985800
Following gene: 94985792
Centisome position: 73.17
GC content: 61.4
Gene sequence:
>798_bases GTGAATCGGCGTGCCTATCCAAGCGACGTGGATGACGAGACGTACCACTTCCTACTGCCGTATCTGGCCCTGAGCCCTGA AGACGCGCCACAACGGAAGTACCCGCTTCGGGAAGTGCTGAATGCGTTGCTGTGGATCAGTCGTACTGGGGCGCAGTGGG AGTATCTGCCCCATGACTTTCCCCCGCCTAAGGTCGTGCGATCTCAGGCCAAACGCTGGTTCGAGGCCCATTGCTTCGAG AACGCCGTGCATGATCTGCGACTGTTCAGCCGCATTCAGCAGCAACGCGGTCAGGAACCGACCGCGATCATCCTCGACAG TCGTACCCTGCAAAGCACACCTGAGAGCGGTCACCGTGCAGGCTACGACGGCGCTAAGCGGCGCAAGGGCACCAAAGTAC ACCTGGCCGTCGACACCCTCGGTCACCTGGTCGCGTTGATGACGACACCCGCCAACGAACAGGACCGTGCCCAGGTCGAG GCCCTGTGTCTAGCGGCGCAGGAGACCACGGGGGGCATGCTGGAATTGGCCTTTGTGGATCAGGGGTACACCGGCGAACA GCCCTTGGAGGCCGCACGCAAGGGGAACATCGAGTTGGTGGTCGTGAAGCGTCCTGACGCTTCACGCGGTTTCGTCCTGC TGCCTAAACGCTGGGTGGTGGAGCGGTCCTTCGCGTGGTTATCGCGCTTCCGTCGGCTGGGACGAGATTTGGAACGCTTG TCCTCGACCCTCATCGGCTTCCATTTTGTCGCCGCCTGCGTTCTGATGCTGGCGAAACTCAAGCCCCTTCTTGGGTAG
Upstream 100 bases:
>100_bases AAGCCCTCTCAGCAGACCCCTGTTCCTGAACACCTCTAGAGGCTGGGTCGAAGGCAAACCAAGTTGCGGGGGCTGGCTCT GCTGTCATCAGAATGGAGGA
Downstream 100 bases:
>100_bases CCTCTTGTCCAGCCTCTAAGCGCCAATCTTCGTTCCAACTCTAGTCGGACCCCTCAAAGAGCTGCTCGGCCAGCAACGCC ACCAGCGGGCGGGTGCCCTC
Product: transposase, IS4
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL SSTLIGFHFVAACVLMLAKLKPLLG
Sequences:
>Translated_265_residues MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL SSTLIGFHFVAACVLMLAKLKPLLG >Mature_265_residues MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL SSTLIGFHFVAACVLMLAKLKPLLG
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30069; Mature: 30069
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PPPKVVRSQAKRWFEAHCFENAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCC GYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVEALCLAAQETTGGMLELAFVD CCCCHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC QGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL CCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SSTLIGFHFVAACVLMLAKLKPLLG HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PPPKVVRSQAKRWFEAHCFENAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCC GYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVEALCLAAQETTGGMLELAFVD CCCCHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC QGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL CCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH SSTLIGFHFVAACVLMLAKLKPLLG HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA