Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94985799

Identifier: 94985799

GI number: 94985799

Start: 1804578

End: 1805375

Strand: Reverse

Name: 94985799

Synonym: Dgeo_1699

Alternate gene names: NA

Gene position: 1805375-1804578 (Counterclockwise)

Preceding gene: 94985800

Following gene: 94985792

Centisome position: 73.17

GC content: 61.4

Gene sequence:

>798_bases
GTGAATCGGCGTGCCTATCCAAGCGACGTGGATGACGAGACGTACCACTTCCTACTGCCGTATCTGGCCCTGAGCCCTGA
AGACGCGCCACAACGGAAGTACCCGCTTCGGGAAGTGCTGAATGCGTTGCTGTGGATCAGTCGTACTGGGGCGCAGTGGG
AGTATCTGCCCCATGACTTTCCCCCGCCTAAGGTCGTGCGATCTCAGGCCAAACGCTGGTTCGAGGCCCATTGCTTCGAG
AACGCCGTGCATGATCTGCGACTGTTCAGCCGCATTCAGCAGCAACGCGGTCAGGAACCGACCGCGATCATCCTCGACAG
TCGTACCCTGCAAAGCACACCTGAGAGCGGTCACCGTGCAGGCTACGACGGCGCTAAGCGGCGCAAGGGCACCAAAGTAC
ACCTGGCCGTCGACACCCTCGGTCACCTGGTCGCGTTGATGACGACACCCGCCAACGAACAGGACCGTGCCCAGGTCGAG
GCCCTGTGTCTAGCGGCGCAGGAGACCACGGGGGGCATGCTGGAATTGGCCTTTGTGGATCAGGGGTACACCGGCGAACA
GCCCTTGGAGGCCGCACGCAAGGGGAACATCGAGTTGGTGGTCGTGAAGCGTCCTGACGCTTCACGCGGTTTCGTCCTGC
TGCCTAAACGCTGGGTGGTGGAGCGGTCCTTCGCGTGGTTATCGCGCTTCCGTCGGCTGGGACGAGATTTGGAACGCTTG
TCCTCGACCCTCATCGGCTTCCATTTTGTCGCCGCCTGCGTTCTGATGCTGGCGAAACTCAAGCCCCTTCTTGGGTAG

Upstream 100 bases:

>100_bases
AAGCCCTCTCAGCAGACCCCTGTTCCTGAACACCTCTAGAGGCTGGGTCGAAGGCAAACCAAGTTGCGGGGGCTGGCTCT
GCTGTCATCAGAATGGAGGA

Downstream 100 bases:

>100_bases
CCTCTTGTCCAGCCTCTAAGCGCCAATCTTCGTTCCAACTCTAGTCGGACCCCTCAAAGAGCTGCTCGGCCAGCAACGCC
ACCAGCGGGCGGGTGCCCTC

Product: transposase, IS4

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE
NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE
ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL
SSTLIGFHFVAACVLMLAKLKPLLG

Sequences:

>Translated_265_residues
MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE
NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE
ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL
SSTLIGFHFVAACVLMLAKLKPLLG
>Mature_265_residues
MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDFPPPKVVRSQAKRWFEAHCFE
NAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRAGYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVE
ALCLAAQETTGGMLELAFVDQGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL
SSTLIGFHFVAACVLMLAKLKPLLG

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30069; Mature: 30069

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDF
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PPPKVVRSQAKRWFEAHCFENAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCC
GYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVEALCLAAQETTGGMLELAFVD
CCCCHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
QGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL
CCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SSTLIGFHFVAACVLMLAKLKPLLG
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRRAYPSDVDDETYHFLLPYLALSPEDAPQRKYPLREVLNALLWISRTGAQWEYLPHDF
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PPPKVVRSQAKRWFEAHCFENAVHDLRLFSRIQQQRGQEPTAIILDSRTLQSTPESGHRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCC
GYDGAKRRKGTKVHLAVDTLGHLVALMTTPANEQDRAQVEALCLAAQETTGGMLELAFVD
CCCCHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
QGYTGEQPLEAARKGNIELVVVKRPDASRGFVLLPKRWVVERSFAWLSRFRRLGRDLERL
CCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SSTLIGFHFVAACVLMLAKLKPLLG
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA