| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985777
Identifier: 94985777
GI number: 94985777
Start: 1782332
End: 1784023
Strand: Reverse
Name: 94985777
Synonym: Dgeo_1677
Alternate gene names: NA
Gene position: 1784023-1782332 (Counterclockwise)
Preceding gene: 94985781
Following gene: 94985771
Centisome position: 72.31
GC content: 65.9
Gene sequence:
>1692_bases ATGATCAAAGGCAAAGAACTGATCGGACGGCCAATTGTCGCGATCGACAGTGGCGAGCGTGTCGAAACGGTCCATGACTT GATTTTTGACCACCAGGCCAACCAGGTGCTCGGCTTGCTGGTAGACGAGGGCGGCTGGTTCCGTGCTGCGCGCGTGGTGC CTTTCGAGGCGGTGCGTGCGTTTGGCGAGGACGCCGTGATGATCGACAGCGCCACCGCCGTGACCTCCACCCGTGAGGAC GGACGGTTGGCAGAGGTGCTGGATTCCAAGGTCAGCCTCATTGGCCTGACACTGCTGACCACCGACGGCGAGAATCTCGG CAAGATCGCGGACGTGTATTTCGACGAGCAGACGGGCCGGGTAGAGGGCTACGAGGCGACCGGCGGCATCTTCAGCGACC TGAGCAGTGGCCGGACCTTTGTGCCCGCCCCTGAGAGCGTGCAGATCGGCGAGGATGCGGCCATCGTGCCGGCCAGCGTG GCGGCGGCGATGCAGGAACAGGCGCCAGGCGGCCTGAAAGGGGCCTTGCAATCGGCGGGCCAGAGCCTCAGCGAGGCGTA CCAGAATGTGGCGAGCAACGTGAAGGAGGGCTACGGCAACATTGCCGAGGCCACCAAGGAACGCCAGAAGGAATACGTGG TCGGCAAGACGGCGGGCAGTGACGTCACCCTGGATGACGGCACCGTGCTCGTCCACAAGGGTGACGTGATCACCGAGAGG CAGGCCGAGCAGGCTGAGCAGGCGGGGAAGCTGCCCGCGCTCACCGCGGCCGCGACCGGCGGGGCCCTCAGCGAGGCCTA CGGCACGGTCCGCGAACGGGTCCAGAGCGGTTACGAGAACATTCAAAAAGAAACGCTGGCTGGCCGAACCGCTACGAGTG ACGTGACGGCCGAGCTGGCAAGTGGCGTGCAGGAAGTGATTGTTCACCGCGGCGAGGTGATTACCCCCTTCCATATTGAA CGTGCGGAGGAAGCGGGTCAGTTGGGCGCCCTGATGGCGGCGGCGGGTGGAGCAGCCGTGGCAGACGCCACCGCTGCTGC GTCTGCCACGGCCCAACCCACGGTAGAGGACACCATTGGCCGCCGGGTCAAGGTGGATGTGCGTGCGCCCGGTGGCGGTC TGGTTGCCGCGCAGGGGCAGATCGTGACCCCGGCCGTCGTGGAGCGTGCCCGCCGCGCTGGTGTGGAGCAGACGCTGATC GCCGCTACGCTGGGTGGTACGGCGGCGTCGGGAGCCGCCGGGGCAACCGCGGCCTTGGCCAGCGGCGTGTCCAGCGTCAG CGAGGAGGCCAGCAACCTGATCGACCGCGCGAAAGCCTGGTTCAGTGACAAGCGCCAGGAAGCGGAGCAGGCCCTCGATC AGCGGCAGCAGGAACTGCAGGAACAGCGTATCCGCGACGCCCTGGGCCGCCCAGTGACCCGCGTGATCCTCGCGCCGGAC GACAGCATCATTCTGAACGTGGGCGAAATCATCACGCACAAGGCCATCGACGCGGCAAGGTCGGGCGGCGTGCTGGATAT CTTGCTTGACAGTGTGAGCAAGGAGGAAGTCAACATCGATCCCCTCGCCACACGTCCCCACGAGACGGGAAAGGCGGCGT TGGAAGGCCAGCCAGATCTTACCCCGGAAGCCGAGCAGTCCGCTGGCAGCCGGATCATCACCGATTCCAACACGCCCAAG AGCCAGAGCTGA
Upstream 100 bases:
>100_bases GCCTTCGCCATGAACGCAGGTGGTCTGCGCCGGCTTTCAGATAATCCTGCGTTTGCCGCGCGTGATCTCACCTTCTTCAA ACTCGAAACGGAGTGACTCC
Downstream 100 bases:
>100_bases GGGCCAGGCAGAGGGGGCGGGCTTCTCTCCGGGAGCCCGCCTCTTGCCCAGCTTGGGCGGAAAGCGGCCCTTTGCTCCGG TCTCACCTTCAACGTGAAGC
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: PRC-Barrel Domain-Containing Protein; Prc-Barrel Domain Protein
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MIKGKELIGRPIVAIDSGERVETVHDLIFDHQANQVLGLLVDEGGWFRAARVVPFEAVRAFGEDAVMIDSATAVTSTRED GRLAEVLDSKVSLIGLTLLTTDGENLGKIADVYFDEQTGRVEGYEATGGIFSDLSSGRTFVPAPESVQIGEDAAIVPASV AAAMQEQAPGGLKGALQSAGQSLSEAYQNVASNVKEGYGNIAEATKERQKEYVVGKTAGSDVTLDDGTVLVHKGDVITER QAEQAEQAGKLPALTAAATGGALSEAYGTVRERVQSGYENIQKETLAGRTATSDVTAELASGVQEVIVHRGEVITPFHIE RAEEAGQLGALMAAAGGAAVADATAAASATAQPTVEDTIGRRVKVDVRAPGGGLVAAQGQIVTPAVVERARRAGVEQTLI AATLGGTAASGAAGATAALASGVSSVSEEASNLIDRAKAWFSDKRQEAEQALDQRQQELQEQRIRDALGRPVTRVILAPD DSIILNVGEIITHKAIDAARSGGVLDILLDSVSKEEVNIDPLATRPHETGKAALEGQPDLTPEAEQSAGSRIITDSNTPK SQS
Sequences:
>Translated_563_residues MIKGKELIGRPIVAIDSGERVETVHDLIFDHQANQVLGLLVDEGGWFRAARVVPFEAVRAFGEDAVMIDSATAVTSTRED GRLAEVLDSKVSLIGLTLLTTDGENLGKIADVYFDEQTGRVEGYEATGGIFSDLSSGRTFVPAPESVQIGEDAAIVPASV AAAMQEQAPGGLKGALQSAGQSLSEAYQNVASNVKEGYGNIAEATKERQKEYVVGKTAGSDVTLDDGTVLVHKGDVITER QAEQAEQAGKLPALTAAATGGALSEAYGTVRERVQSGYENIQKETLAGRTATSDVTAELASGVQEVIVHRGEVITPFHIE RAEEAGQLGALMAAAGGAAVADATAAASATAQPTVEDTIGRRVKVDVRAPGGGLVAAQGQIVTPAVVERARRAGVEQTLI AATLGGTAASGAAGATAALASGVSSVSEEASNLIDRAKAWFSDKRQEAEQALDQRQQELQEQRIRDALGRPVTRVILAPD DSIILNVGEIITHKAIDAARSGGVLDILLDSVSKEEVNIDPLATRPHETGKAALEGQPDLTPEAEQSAGSRIITDSNTPK SQS >Mature_563_residues MIKGKELIGRPIVAIDSGERVETVHDLIFDHQANQVLGLLVDEGGWFRAARVVPFEAVRAFGEDAVMIDSATAVTSTRED GRLAEVLDSKVSLIGLTLLTTDGENLGKIADVYFDEQTGRVEGYEATGGIFSDLSSGRTFVPAPESVQIGEDAAIVPASV AAAMQEQAPGGLKGALQSAGQSLSEAYQNVASNVKEGYGNIAEATKERQKEYVVGKTAGSDVTLDDGTVLVHKGDVITER QAEQAEQAGKLPALTAAATGGALSEAYGTVRERVQSGYENIQKETLAGRTATSDVTAELASGVQEVIVHRGEVITPFHIE RAEEAGQLGALMAAAGGAAVADATAAASATAQPTVEDTIGRRVKVDVRAPGGGLVAAQGQIVTPAVVERARRAGVEQTLI AATLGGTAASGAAGATAALASGVSSVSEEASNLIDRAKAWFSDKRQEAEQALDQRQQELQEQRIRDALGRPVTRVILAPD DSIILNVGEIITHKAIDAARSGGVLDILLDSVSKEEVNIDPLATRPHETGKAALEGQPDLTPEAEQSAGSRIITDSNTPK SQS
Specific function: Unknown
COG id: COG3881
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58521; Mature: 58521
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKGKELIGRPIVAIDSGERVETVHDLIFDHQANQVLGLLVDEGGWFRAARVVPFEAVRA CCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHH FGEDAVMIDSATAVTSTREDGRLAEVLDSKVSLIGLTLLTTDGENLGKIADVYFDEQTGR CCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHEECCCCCC VEGYEATGGIFSDLSSGRTFVPAPESVQIGEDAAIVPASVAAAMQEQAPGGLKGALQSAG CCCEECCCCHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH QSLSEAYQNVASNVKEGYGNIAEATKERQKEYVVGKTAGSDVTLDDGTVLVHKGDVITER HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEECCCEEEEECCCCCCHH QAEQAEQAGKLPALTAAATGGALSEAYGTVRERVQSGYENIQKETLAGRTATSDVTAELA HHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SGVQEVIVHRGEVITPFHIERAEEAGQLGALMAAAGGAAVADATAAASATAQPTVEDTIG HHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCC RRVKVDVRAPGGGLVAAQGQIVTPAVVERARRAGVEQTLIAATLGGTAASGAAGATAALA CEEEEEEECCCCCEEEECCCEECHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHH SGVSSVSEEASNLIDRAKAWFSDKRQEAEQALDQRQQELQEQRIRDALGRPVTRVILAPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DSIILNVGEIITHKAIDAARSGGVLDILLDSVSKEEVNIDPLATRPHETGKAALEGQPDL CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPEAEQSAGSRIITDSNTPKSQS CCCHHHCCCCEEEECCCCCCCCC >Mature Secondary Structure MIKGKELIGRPIVAIDSGERVETVHDLIFDHQANQVLGLLVDEGGWFRAARVVPFEAVRA CCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHH FGEDAVMIDSATAVTSTREDGRLAEVLDSKVSLIGLTLLTTDGENLGKIADVYFDEQTGR CCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHEECCCCCC VEGYEATGGIFSDLSSGRTFVPAPESVQIGEDAAIVPASVAAAMQEQAPGGLKGALQSAG CCCEECCCCHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH QSLSEAYQNVASNVKEGYGNIAEATKERQKEYVVGKTAGSDVTLDDGTVLVHKGDVITER HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCEEECCCEEEEECCCCCCHH QAEQAEQAGKLPALTAAATGGALSEAYGTVRERVQSGYENIQKETLAGRTATSDVTAELA HHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH SGVQEVIVHRGEVITPFHIERAEEAGQLGALMAAAGGAAVADATAAASATAQPTVEDTIG HHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHCC RRVKVDVRAPGGGLVAAQGQIVTPAVVERARRAGVEQTLIAATLGGTAASGAAGATAALA CEEEEEEECCCCCEEEECCCEECHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHH SGVSSVSEEASNLIDRAKAWFSDKRQEAEQALDQRQQELQEQRIRDALGRPVTRVILAPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DSIILNVGEIITHKAIDAARSGGVLDILLDSVSKEEVNIDPLATRPHETGKAALEGQPDL CCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPEAEQSAGSRIITDSNTPKSQS CCCHHHCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA