| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985682
Identifier: 94985682
GI number: 94985682
Start: 1683779
End: 1684852
Strand: Reverse
Name: 94985682
Synonym: Dgeo_1582
Alternate gene names: NA
Gene position: 1684852-1683779 (Counterclockwise)
Preceding gene: 94985685
Following gene: 94985679
Centisome position: 68.29
GC content: 68.62
Gene sequence:
>1074_bases ATGCCGCGCGCCTCCCACTCAAAGTACGCTCCGTTTCCCCGTGCCAAAAAACCCCAGGGTCACCACCGCGCCCGCCAGCC TGCCCACGCGTACCTGCTCGAAGTCCTGCCCGGTCTGGAGCCGGTGGCGGAGGGGGAACTGCGAACTGTGCCTCTCGCGC GCGACATCCGTGGCCTGCGCTTCTGGTACCCCGGTGACCCCGAGCGTCTCACCCGGCTGCGCGCCCCGGTGGCGGTCTTC CGCGTGCGGGCCTGGGACGTACCGCGGCCCCGCGGGCTGCTGGGGCACCAGCAATTCGCGGAACTCACGGCCTTTTTGGC AGGCGTGGTGCAGTTTGGCGGTCACCGCTCTTTCCGGCTGGCGGCAGCAGGCCGGGAATCAAGTGTGATGGAGCGCCTCG CTGATGAACTCCAGGCTGCTTTGAATCTCCCCCACGACCCCGAAGAAGGCGAGCTGCTGATCCGCCTGCGGCCTCAGGAG GACGGTCCCGGCTGGGAGGTCCTCGCGCGTCTCACGCCCCGGCCCCTCAGCGTGCGGCCCTGGCGGGTATGCAACATGGG CGGCGGCCTGAACGCCACCATTGCCTATGCCCTGCACAAGCTGGCCGGACAGCGTGATGAAGACCGCATCTTCAACCCCA TGAGTGGCAGCGGCACCCTGCTGGTCGAGCGGGCGCTCCTCGGCCCCTACGCTGCGATGGTCGGCGTGGACCTGAACCCC GAGGCCGTCGCGTGTGCGCGCGCCAACCTGCACGCTGCCAAACGGGACGTGGAGGTCGCCTGCGTGGACGCCCTGCACAC CGGCCTGCCGCCCCGTTCCTTTGACCTGATCGTCAGCGACCTGCCCTGGGGGGACGCGGTGGGCACCCACGGTGACAATG CCGCCCTCTACCCCGCCTTCCTGGGGGAGATGCACCGGCTGCTGAGTCGCCAGGGCCGTCTGGTTGTCCTGACCCACGAG CTGCGGCTGTTTGAGCGCGTTCTGCGCGAACAGGAACGCTGGTATGCCCGCGAACTCTTTCAGGTCTACAGTGGGGGGCA TCATCCCAAGGCCTACCTGCTCAGCAAGCGGTGA
Upstream 100 bases:
>100_bases CACGGGCACCGGAGGCTCGGGGAGTGGGGGGGCGCGTCATAGGAAACGTGCGATTCTACCACCGCCCCCGCGCCGTGGCG CCCGGCTATACTGCCCTGCT
Downstream 100 bases:
>100_bases GAGGATCAGTCCAGCTGCCCTTCTTGAGTCGCCTGAAGAGGACTTGCGCCTACCGCCGCGCCGCCCGAACCACCCGCGCC ATTCCCGCCAGGACCACCAC
Product: putative RNA methylase
Products: NA
Alternate protein names: N6-Adenine-Specific DNA Methylase; Methyltransferase; RNA Methyltransferase; N6-Adenine-Specific RNA Methylase
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPRASHSKYAPFPRAKKPQGHHRARQPAHAYLLEVLPGLEPVAEGELRTVPLARDIRGLRFWYPGDPERLTRLRAPVAVF RVRAWDVPRPRGLLGHQQFAELTAFLAGVVQFGGHRSFRLAAAGRESSVMERLADELQAALNLPHDPEEGELLIRLRPQE DGPGWEVLARLTPRPLSVRPWRVCNMGGGLNATIAYALHKLAGQRDEDRIFNPMSGSGTLLVERALLGPYAAMVGVDLNP EAVACARANLHAAKRDVEVACVDALHTGLPPRSFDLIVSDLPWGDAVGTHGDNAALYPAFLGEMHRLLSRQGRLVVLTHE LRLFERVLREQERWYARELFQVYSGGHHPKAYLLSKR
Sequences:
>Translated_357_residues MPRASHSKYAPFPRAKKPQGHHRARQPAHAYLLEVLPGLEPVAEGELRTVPLARDIRGLRFWYPGDPERLTRLRAPVAVF RVRAWDVPRPRGLLGHQQFAELTAFLAGVVQFGGHRSFRLAAAGRESSVMERLADELQAALNLPHDPEEGELLIRLRPQE DGPGWEVLARLTPRPLSVRPWRVCNMGGGLNATIAYALHKLAGQRDEDRIFNPMSGSGTLLVERALLGPYAAMVGVDLNP EAVACARANLHAAKRDVEVACVDALHTGLPPRSFDLIVSDLPWGDAVGTHGDNAALYPAFLGEMHRLLSRQGRLVVLTHE LRLFERVLREQERWYARELFQVYSGGHHPKAYLLSKR >Mature_356_residues PRASHSKYAPFPRAKKPQGHHRARQPAHAYLLEVLPGLEPVAEGELRTVPLARDIRGLRFWYPGDPERLTRLRAPVAVFR VRAWDVPRPRGLLGHQQFAELTAFLAGVVQFGGHRSFRLAAAGRESSVMERLADELQAALNLPHDPEEGELLIRLRPQED GPGWEVLARLTPRPLSVRPWRVCNMGGGLNATIAYALHKLAGQRDEDRIFNPMSGSGTLLVERALLGPYAAMVGVDLNPE AVACARANLHAAKRDVEVACVDALHTGLPPRSFDLIVSDLPWGDAVGTHGDNAALYPAFLGEMHRLLSRQGRLVVLTHEL RLFERVLREQERWYARELFQVYSGGHHPKAYLLSKR
Specific function: Unknown
COG id: COG0116
COG function: function code L; Predicted N6-adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI166197708, Length=180, Percent_Identity=31.1111111111111, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI166197706, Length=180, Percent_Identity=31.1111111111111, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32566195, Length=221, Percent_Identity=27.6018099547511, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39848; Mature: 39717
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRASHSKYAPFPRAKKPQGHHRARQPAHAYLLEVLPGLEPVAEGELRTVPLARDIRGLR CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCE FWYPGDPERLTRLRAPVAVFRVRAWDVPRPRGLLGHQQFAELTAFLAGVVQFGGHRSFRL EECCCCHHHHHHHHCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE AAAGRESSVMERLADELQAALNLPHDPEEGELLIRLRPQEDGPGWEVLARLTPRPLSVRP EECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCC WRVCNMGGGLNATIAYALHKLAGQRDEDRIFNPMSGSGTLLVERALLGPYAAMVGVDLNP EEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHEECCCCC EAVACARANLHAAKRDVEVACVDALHTGLPPRSFDLIVSDLPWGDAVGTHGDNAALYPAF CHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHH LGEMHRLLSRQGRLVVLTHELRLFERVLREQERWYARELFQVYSGGHHPKAYLLSKR HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC >Mature Secondary Structure PRASHSKYAPFPRAKKPQGHHRARQPAHAYLLEVLPGLEPVAEGELRTVPLARDIRGLR CCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCE FWYPGDPERLTRLRAPVAVFRVRAWDVPRPRGLLGHQQFAELTAFLAGVVQFGGHRSFRL EECCCCHHHHHHHHCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE AAAGRESSVMERLADELQAALNLPHDPEEGELLIRLRPQEDGPGWEVLARLTPRPLSVRP EECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCC WRVCNMGGGLNATIAYALHKLAGQRDEDRIFNPMSGSGTLLVERALLGPYAAMVGVDLNP EEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHEECCCCC EAVACARANLHAAKRDVEVACVDALHTGLPPRSFDLIVSDLPWGDAVGTHGDNAALYPAF CHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHH LGEMHRLLSRQGRLVVLTHELRLFERVLREQERWYARELFQVYSGGHHPKAYLLSKR HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA