| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is aroA [H]
Identifier: 94985672
GI number: 94985672
Start: 1671359
End: 1672498
Strand: Reverse
Name: aroA [H]
Synonym: Dgeo_1572
Alternate gene names: 94985672
Gene position: 1672498-1671359 (Counterclockwise)
Preceding gene: 94985673
Following gene: 94985668
Centisome position: 67.79
GC content: 66.84
Gene sequence:
>1140_bases TTGACTAGCGGTGTGAGGCCAGAACACGAAGCGCTTTTCTACACTGGCCGCATGACCCAACGCAGTATCGACGACCTCCG CGCCGAGGTCGATGCCATCAACCGTGACCTTCTGACCCTGCTCTCGCGCCGTGGCGAGGTGGTCGCGCAGATCGGCCGGG CCAAAACCCAGGAGGGCCGCCCGCAGCACTACGATCCCGCCCGCGAGGAACAGCAGCTGCGCGTGCTGGAGCAGCTGAAC CCTGGCCCCTTCACGAGCGCCGCCGTCAAGGCCATCTTCAAGGAAATTTTCAAGGCCAGCCTGGACCTTGAGGAGAGCAA CGACAAAAAGCAGCTGCTGGTGTCACGTAAGGTCAAACCCGAGGACACCCAGCTCGACATCGACGGCGTCCGCATCGGCG GGGGCGCCCCGCCCGTCGTGATTGCGGGGCCCTGCTCCATCGAGTCGGAAGAGCAGATGGAGGAGACGGCCCGTTTCCTG GCCTCGCGCGGCGTGAAGATCCTGCGCGGCGGTGCCTACAAACCCCGCACCAGTCCCTACGGCTTCCAGGGCATGGGCGT GGACGGCTTGATCATCGGCGGGCGGGCGGCGCGCGAGAATGGCATGCTCTTTGTGACCGAAGTGATGGACACCCGCGATG TGGAGGTCGTGGCCGAGCACGCCGACATCCTCCAGGTGGGCGCGCGCAACATGCACAACTTCAGCCTGCTCCGTGAAGTG GGCCGCGCCCGGCGCCCGGTGCTGCTCAAGCGCGGCCTGAGCGCCACCATCGAAGAGTGGCTCTATGCCGCCGAGTACAT CCTCTCGGAGGGGAACCCCGAAGTGATCCTCTGCGAGCGCGGCATTCGCACCTTTGAGAAGTGGACCCGCAACACCCTCG ACCTCTCGGCGGTGGCTCTTGCCAAGCAGGAGACGCACCTCCCGGTCATCGTGGACGTGACGCACGCCGCCGGACGCCGC GACCTGCTGATCCCGCTTGCCAGAGCCGCCCTTGCCGTCGGCGCCGACGGCATCCACGTCGAGGTCCACCCCAGCCCCGC CACCGCCCTGAGCGACAACGAGCAGCAGCTCGACTTCGCGGGGTACGACCGCTTCCTCGACGCGCTGGCGCCACTGCTCA AGGTGGCCGCGACCGTCTGA
Upstream 100 bases:
>100_bases GAGGCTGAGGCCCGCGAACTGTACGCAGCGCTCTCGCGGGTGGCGGTGCACATGGTGAATACGCCGGAAGCGGAGCCAGA ACCTGGACAGGTTTTTTCAA
Downstream 100 bases:
>100_bases TTTCGCCGCCTGCGAAGCGAGTGATCCCCGGAATAGGCCCAGCCCTCGCCCGAGATCCTGACACCGTTATGAACAGAAAG GCGGACCGGAAGCCCTGGTC
Product: bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
Products: NA
Alternate protein names: Phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase; Chorismate mutase [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTSGVRPEHEALFYTGRMTQRSIDDLRAEVDAINRDLLTLLSRRGEVVAQIGRAKTQEGRPQHYDPAREEQQLRVLEQLN PGPFTSAAVKAIFKEIFKASLDLEESNDKKQLLVSRKVKPEDTQLDIDGVRIGGGAPPVVIAGPCSIESEEQMEETARFL ASRGVKILRGGAYKPRTSPYGFQGMGVDGLIIGGRAARENGMLFVTEVMDTRDVEVVAEHADILQVGARNMHNFSLLREV GRARRPVLLKRGLSATIEEWLYAAEYILSEGNPEVILCERGIRTFEKWTRNTLDLSAVALAKQETHLPVIVDVTHAAGRR DLLIPLARAALAVGADGIHVEVHPSPATALSDNEQQLDFAGYDRFLDALAPLLKVAATV
Sequences:
>Translated_379_residues MTSGVRPEHEALFYTGRMTQRSIDDLRAEVDAINRDLLTLLSRRGEVVAQIGRAKTQEGRPQHYDPAREEQQLRVLEQLN PGPFTSAAVKAIFKEIFKASLDLEESNDKKQLLVSRKVKPEDTQLDIDGVRIGGGAPPVVIAGPCSIESEEQMEETARFL ASRGVKILRGGAYKPRTSPYGFQGMGVDGLIIGGRAARENGMLFVTEVMDTRDVEVVAEHADILQVGARNMHNFSLLREV GRARRPVLLKRGLSATIEEWLYAAEYILSEGNPEVILCERGIRTFEKWTRNTLDLSAVALAKQETHLPVIVDVTHAAGRR DLLIPLARAALAVGADGIHVEVHPSPATALSDNEQQLDFAGYDRFLDALAPLLKVAATV >Mature_378_residues TSGVRPEHEALFYTGRMTQRSIDDLRAEVDAINRDLLTLLSRRGEVVAQIGRAKTQEGRPQHYDPAREEQQLRVLEQLNP GPFTSAAVKAIFKEIFKASLDLEESNDKKQLLVSRKVKPEDTQLDIDGVRIGGGAPPVVIAGPCSIESEEQMEETARFLA SRGVKILRGGAYKPRTSPYGFQGMGVDGLIIGGRAARENGMLFVTEVMDTRDVEVVAEHADILQVGARNMHNFSLLREVG RARRPVLLKRGLSATIEEWLYAAEYILSEGNPEVILCERGIRTFEKWTRNTLDLSAVALAKQETHLPVIVDVTHAAGRRD LLIPLARAALAVGADGIHVEVHPSPATALSDNEQQLDFAGYDRFLDALAPLLKVAATV
Specific function: Synthesis Of Kdo 8-P Which Is Required For Lipid A Maturation And Cellular Growth. [C]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 chorismate mutase domain [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=207, Percent_Identity=27.0531400966184, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002701 - InterPro: IPR010954 - InterPro: IPR020822 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF01817 CM_2; PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54; =5.4.99.5 [H]
Molecular weight: Translated: 41686; Mature: 41555
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGVRPEHEALFYTGRMTQRSIDDLRAEVDAINRDLLTLLSRRGEVVAQIGRAKTQEGR CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC PQHYDPAREEQQLRVLEQLNPGPFTSAAVKAIFKEIFKASLDLEESNDKKQLLVSRKVKP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC EDTQLDIDGVRIGGGAPPVVIAGPCSIESEEQMEETARFLASRGVKILRGGAYKPRTSPY CCCEEEECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC GFQGMGVDGLIIGGRAARENGMLFVTEVMDTRDVEVVAEHADILQVGARNMHNFSLLREV CCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GRARRPVLLKRGLSATIEEWLYAAEYILSEGNPEVILCERGIRTFEKWTRNTLDLSAVAL HHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHH AKQETHLPVIVDVTHAAGRRDLLIPLARAALAVGADGIHVEVHPSPATALSDNEQQLDFA HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCHH GYDRFLDALAPLLKVAATV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSGVRPEHEALFYTGRMTQRSIDDLRAEVDAINRDLLTLLSRRGEVVAQIGRAKTQEGR CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC PQHYDPAREEQQLRVLEQLNPGPFTSAAVKAIFKEIFKASLDLEESNDKKQLLVSRKVKP CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC EDTQLDIDGVRIGGGAPPVVIAGPCSIESEEQMEETARFLASRGVKILRGGAYKPRTSPY CCCEEEECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC GFQGMGVDGLIIGGRAARENGMLFVTEVMDTRDVEVVAEHADILQVGARNMHNFSLLREV CCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GRARRPVLLKRGLSATIEEWLYAAEYILSEGNPEVILCERGIRTFEKWTRNTLDLSAVAL HHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHH AKQETHLPVIVDVTHAAGRRDLLIPLARAALAVGADGIHVEVHPSPATALSDNEQQLDFA HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCHH GYDRFLDALAPLLKVAATV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7496534; 9387221; 9384377 [H]