| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985630
Identifier: 94985630
GI number: 94985630
Start: 1620084
End: 1620650
Strand: Reverse
Name: 94985630
Synonym: Dgeo_1530
Alternate gene names: NA
Gene position: 1620650-1620084 (Counterclockwise)
Preceding gene: 94985635
Following gene: 94985629
Centisome position: 65.69
GC content: 65.43
Gene sequence:
>567_bases ATGCATGCCGATATGAAAAAGATTCTCATGCTGACCGCGTTTGCGCTTGCTGGCCTCGCTGCTGCGCAGGACACCACCAC GCCCGCTACCCCGCCCAGCGAGACCAGCACCGGCACCACGACCGACACGAGCACCACCACGGACACCAGCATGCAGGAGA CCAGCGGCCCCGCGACCCTGAGTGCCTCCGAGAACTTCGCCCGTGCGCAGGAATTCGCGGTACAGGCGGACGTGGCCTAC CCGGTCCCCTTCTATGACCGCACGCTCTGGAAGGCGGCGGTGGACTCGGCCTACTACGCCGCGACCATGGACTCCAGCAA CCGCGACTACCAGGCCTACCTGGCCCAGCTCTACACCAAGACCCAGTGGTGGATCAACGCCTACAACGCCTGGAACCGGC TGGGCAACCTGAGTGACCAGGAGAAGCAGTGGGCCTCCCTCAGCGCGGCCAAGCTTGCCTACATCGCCCTGCAGCGCGGC GACAAGCAGATGGCCCGCATGTATGTGGACAAGGGCATGAGCTGGGCGCCCAGCGCCAGCCTCCAGGCCATCATGAGCCG CCTCTGA
Upstream 100 bases:
>100_bases GTGAGAAGGTAAGGATTTTTCTCATGTGAAGGTAAGCTCCTTTACAGTCCCTTTACAGGGTGTGGGGACGAATGGACGGC TGCAAGGGTAGCGTCCTAAG
Downstream 100 bases:
>100_bases TTCGACCCCTCCGCCCCTGGAGCGTGTGCGCCTCCCGTGTGAGGCGCCTTTTTTATGTTTTATGCGGACGGCCCTTGTGC CTAGACTGCGGTGATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MHADMKKILMLTAFALAGLAAAQDTTTPATPPSETSTGTTTDTSTTTDTSMQETSGPATLSASENFARAQEFAVQADVAY PVPFYDRTLWKAAVDSAYYAATMDSSNRDYQAYLAQLYTKTQWWINAYNAWNRLGNLSDQEKQWASLSAAKLAYIALQRG DKQMARMYVDKGMSWAPSASLQAIMSRL
Sequences:
>Translated_188_residues MHADMKKILMLTAFALAGLAAAQDTTTPATPPSETSTGTTTDTSTTTDTSMQETSGPATLSASENFARAQEFAVQADVAY PVPFYDRTLWKAAVDSAYYAATMDSSNRDYQAYLAQLYTKTQWWINAYNAWNRLGNLSDQEKQWASLSAAKLAYIALQRG DKQMARMYVDKGMSWAPSASLQAIMSRL >Mature_188_residues MHADMKKILMLTAFALAGLAAAQDTTTPATPPSETSTGTTTDTSTTTDTSMQETSGPATLSASENFARAQEFAVQADVAY PVPFYDRTLWKAAVDSAYYAATMDSSNRDYQAYLAQLYTKTQWWINAYNAWNRLGNLSDQEKQWASLSAAKLAYIALQRG DKQMARMYVDKGMSWAPSASLQAIMSRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20658; Mature: 20658
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADMKKILMLTAFALAGLAAAQDTTTPATPPSETSTGTTTDTSTTTDTSMQETSGPATL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEE SASENFARAQEFAVQADVAYPVPFYDRTLWKAAVDSAYYAATMDSSNRDYQAYLAQLYTK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH TQWWINAYNAWNRLGNLSDQEKQWASLSAAKLAYIALQRGDKQMARMYVDKGMSWAPSAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH LQAIMSRL HHHHHHHC >Mature Secondary Structure MHADMKKILMLTAFALAGLAAAQDTTTPATPPSETSTGTTTDTSTTTDTSMQETSGPATL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEE SASENFARAQEFAVQADVAYPVPFYDRTLWKAAVDSAYYAATMDSSNRDYQAYLAQLYTK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH TQWWINAYNAWNRLGNLSDQEKQWASLSAAKLAYIALQRGDKQMARMYVDKGMSWAPSAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH LQAIMSRL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA