| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985571
Identifier: 94985571
GI number: 94985571
Start: 1557223
End: 1558191
Strand: Reverse
Name: 94985571
Synonym: Dgeo_1471
Alternate gene names: NA
Gene position: 1558191-1557223 (Counterclockwise)
Preceding gene: 94985576
Following gene: 94985570
Centisome position: 63.16
GC content: 67.8
Gene sequence:
>969_bases ATGCCGATCTTCACTCAAGCTGGCACGCCGCAAAGGCTGGGGAGGCCCCTGACTGTTCTGGTCCTGTTTGCGCTGCTGCT GATTCTGCTGATGCTGCTGGGCCACGCCGCCGCACAGTCCGGCGGAGGCTTTGGGGGCAGCACTGGGGGCAGTTCTGGCG GGGGCGGGAGCTTCGGAGGTGGGGGGTACAGCGGCGGGGGCTACTCGGGCGGCGGCTACTCCGGCCCGATCATCGTCGGG GGCGGATTTCCGGGCGGGTACTCCGGCGGAGGCGGCGGCTTCGGCCTCTTCGGGTTGATCATCTTCGCGCTGGTGATCTT TGCTGTGGTCGGCTTCATGCGCCGCAGCCTGGGCGGGGGAGGCGCGCGGGGTTTGGGCGCCCTTGGCGGTGTCAGTGGGA CCGCGCAGGCGGTGAGTGTCCAGCTCCTGCTGGCCGAGGGTGACGAGGTGAAACGTGACCTCCAGCGGATTGCCCAGCAG GGGGACCCCGACACGAATGAGGGCCTCGCCCGGATGCTTCAGGAAGCGGCCCTGGTTCTGCTGCGCCATCCCGAGCGCTG GGTGTACGGCAATGTCGAGCGCGCCCAGGGAGCGGCCAGCAGCGCCGACAGTCAGGTGGGTGCCTGGGCCACCGAGGCGC GCGCCGCCTTTACGGAGCAAACCACCAGCAACTACCAAAACCGCGATCCCCACAGCGGTTACACGCACCGGAGTGACTAC ACTTTCCAGAAGGAGGCGGGCGACCTGTACTTGGCCGTCACGATCGCCGTTGCCGCCCACGCCTTGGGCAACCTGCCCCC GGCCGGCGTGACCACGGCCGCCGAGGCCCGCGAGGCCCTGATGGCGATCAGCAGCGTGAATCCCGGCGACCTGATCCGCG CCGAAGTGGTTTGGAGTCCTGACGCCGAGGGTGAATTCCTCAGTGAGGATGAGGCGATCCGGAAGTATCCGAAGTTGACG AAGCTGTAA
Upstream 100 bases:
>100_bases GTCTGCTGGGAGAGGCGGGTAGGGAGAGGCAGGTCTTGTCTTTGTCGTCTCTTGACGTTGTGGGAACCCGCTGTGGCCGC AGCTCATACACTGGGACATC
Downstream 100 bases:
>100_bases GCGGCGCGGGTCCAGCGGTGTGGGGGGCGAAGGCATAGGCTTTTGCCCCCGTCGCTCCGGGGTCCTGCCCAAGCGGGATC TCCCCGTAACCCTCCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MPIFTQAGTPQRLGRPLTVLVLFALLLILLMLLGHAAAQSGGGFGGSTGGSSGGGGSFGGGGYSGGGYSGGGYSGPIIVG GGFPGGYSGGGGGFGLFGLIIFALVIFAVVGFMRRSLGGGGARGLGALGGVSGTAQAVSVQLLLAEGDEVKRDLQRIAQQ GDPDTNEGLARMLQEAALVLLRHPERWVYGNVERAQGAASSADSQVGAWATEARAAFTEQTTSNYQNRDPHSGYTHRSDY TFQKEAGDLYLAVTIAVAAHALGNLPPAGVTTAAEAREALMAISSVNPGDLIRAEVVWSPDAEGEFLSEDEAIRKYPKLT KL
Sequences:
>Translated_322_residues MPIFTQAGTPQRLGRPLTVLVLFALLLILLMLLGHAAAQSGGGFGGSTGGSSGGGGSFGGGGYSGGGYSGGGYSGPIIVG GGFPGGYSGGGGGFGLFGLIIFALVIFAVVGFMRRSLGGGGARGLGALGGVSGTAQAVSVQLLLAEGDEVKRDLQRIAQQ GDPDTNEGLARMLQEAALVLLRHPERWVYGNVERAQGAASSADSQVGAWATEARAAFTEQTTSNYQNRDPHSGYTHRSDY TFQKEAGDLYLAVTIAVAAHALGNLPPAGVTTAAEAREALMAISSVNPGDLIRAEVVWSPDAEGEFLSEDEAIRKYPKLT KL >Mature_321_residues PIFTQAGTPQRLGRPLTVLVLFALLLILLMLLGHAAAQSGGGFGGSTGGSSGGGGSFGGGGYSGGGYSGGGYSGPIIVGG GFPGGYSGGGGGFGLFGLIIFALVIFAVVGFMRRSLGGGGARGLGALGGVSGTAQAVSVQLLLAEGDEVKRDLQRIAQQG DPDTNEGLARMLQEAALVLLRHPERWVYGNVERAQGAASSADSQVGAWATEARAAFTEQTTSNYQNRDPHSGYTHRSDYT FQKEAGDLYLAVTIAVAAHALGNLPPAGVTTAAEAREALMAISSVNPGDLIRAEVVWSPDAEGEFLSEDEAIRKYPKLTK L
Specific function: Unknown
COG id: COG4371
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32876; Mature: 32745
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFTQAGTPQRLGRPLTVLVLFALLLILLMLLGHAAAQSGGGFGGSTGGSSGGGGSFGG CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GGYSGGGYSGGGYSGPIIVGGGFPGGYSGGGGGFGLFGLIIFALVIFAVVGFMRRSLGGG CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GARGLGALGGVSGTAQAVSVQLLLAEGDEVKRDLQRIAQQGDPDTNEGLARMLQEAALVL CCCCHHHHCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRHPERWVYGNVERAQGAASSADSQVGAWATEARAAFTEQTTSNYQNRDPHSGYTHRSDY HHCCCHHEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TFQKEAGDLYLAVTIAVAAHALGNLPPAGVTTAAEAREALMAISSVNPGDLIRAEVVWSP CCHHCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC DAEGEFLSEDEAIRKYPKLTKL CCCCCCCCCCHHHHHCCHHCCC >Mature Secondary Structure PIFTQAGTPQRLGRPLTVLVLFALLLILLMLLGHAAAQSGGGFGGSTGGSSGGGGSFGG CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GGYSGGGYSGGGYSGPIIVGGGFPGGYSGGGGGFGLFGLIIFALVIFAVVGFMRRSLGGG CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GARGLGALGGVSGTAQAVSVQLLLAEGDEVKRDLQRIAQQGDPDTNEGLARMLQEAALVL CCCCHHHHCCCCCCCHHEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRHPERWVYGNVERAQGAASSADSQVGAWATEARAAFTEQTTSNYQNRDPHSGYTHRSDY HHCCCHHEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TFQKEAGDLYLAVTIAVAAHALGNLPPAGVTTAAEAREALMAISSVNPGDLIRAEVVWSP CCHHCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC DAEGEFLSEDEAIRKYPKLTKL CCCCCCCCCCHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA