| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985568
Identifier: 94985568
GI number: 94985568
Start: 1554716
End: 1555771
Strand: Reverse
Name: 94985568
Synonym: Dgeo_1468
Alternate gene names: NA
Gene position: 1555771-1554716 (Counterclockwise)
Preceding gene: 94985570
Following gene: 94985563
Centisome position: 63.06
GC content: 69.41
Gene sequence:
>1056_bases GTGCCTGACCCTGAGGCTGACGCCGCGCTGCTGGAGCTTTGGGACCTGTGGGTGCGGGCCGGAGATGGGCGCATGCCCCT GACGCTGCTCCCCGACCTAGGCGACCTGCTTCGCCTGCATCCCCAGTTCAACGCAGGGACGGTGGTTGAGGTGTTGCGCC ACCTGCAGGCACGTGGTCTGGACGTGCCGGAGGTGCTGTGGGCCAGTGGCCCCGATCCCGACCACCCTTTGCGGGACGCC CTGCCCGCCGCGCACTTTTTGCTGCGCGAATTGCCCCTGCCGTTCGCTGAGGCCGAGACCGATCACGCGCAGCTTGTGGC CTTTCTCAACCAGTATCCCCAGGGCCGCGAGCGCCTGCGCGCGGCGGAGCAGGCGGAACAGGCCTTCGCCACGGTCTTGA CCGCCCCGCTCACCGTTCAGCGTGCCCTGAGTGAAGAGCTGCAGGTGGCGACCCGGACCTATCACGCGGCCATTCGGGCA GCTTTGGGTGAGGGGCCCGGGACCCGCTGGCGCGAACGGCGGCTGAAGGCGGTCACGAGTGCACTCGCCGCGGTCACAGA AGGCGTGGTGCTTCTCCCACTGGACGATCTCCCTGACCTGCTCGCCGAGCTGCCCGCAGCGCGACTTCCGGATCTGACAG GTTTCATGCCCGGTGAAACGTCGCGCCTGCGCGCTCTGGCGGACCGTGCCTGGCAACTGCGTGAGGACGACGATCTGGGA GCGCTCCTGGAGGCGCTGGAACGCGAGACGGGGGATGCGGTGACGCCGAGGGTCGAACTGGATGCCGCCGCCGCCGGCAT TTATCTGGCTGTGGGTGATCTGGAGAGTGCCCGCGCCCTCCTCGAGCGTGCCGCCCATGGCCTCACCGATGATCTGCCGC GCAGCCTGCCGGGACTGGTGCTCGCCCGGCTCGGACAGGTGCGGGATGCCCAGGGCGACCGCGAGCTGGCCCAGCGAAGC TACCGCGCCCTCCTGGCGCTGTCCTATGCGCCGGCCTTCGCTCGTGAGGCAGCGGAGGCGGGTTTGCGCGCACCCTTTCG GCTTGATCTGGCTTGA
Upstream 100 bases:
>100_bases CCATGCCACAAGCTGTTGTGCCGGCGCTGGTCCGCAAGGTCTGTTTGGCGAGCGCAGACCCTCCGTGCCTGGGGTGGATG CTGGTGGCCCAAGGTGCTCG
Downstream 100 bases:
>100_bases TCTGGAGAGTGACAACGAAGGGTGCTGGGGCAGCCTGAGCGTTGAACGCGCATTGTAGAGAACGCGTATTGTGGATGCTG GAAGACCAATAGAAGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPDPEADAALLELWDLWVRAGDGRMPLTLLPDLGDLLRLHPQFNAGTVVEVLRHLQARGLDVPEVLWASGPDPDHPLRDA LPAAHFLLRELPLPFAEAETDHAQLVAFLNQYPQGRERLRAAEQAEQAFATVLTAPLTVQRALSEELQVATRTYHAAIRA ALGEGPGTRWRERRLKAVTSALAAVTEGVVLLPLDDLPDLLAELPAARLPDLTGFMPGETSRLRALADRAWQLREDDDLG ALLEALERETGDAVTPRVELDAAAAGIYLAVGDLESARALLERAAHGLTDDLPRSLPGLVLARLGQVRDAQGDRELAQRS YRALLALSYAPAFAREAAEAGLRAPFRLDLA
Sequences:
>Translated_351_residues MPDPEADAALLELWDLWVRAGDGRMPLTLLPDLGDLLRLHPQFNAGTVVEVLRHLQARGLDVPEVLWASGPDPDHPLRDA LPAAHFLLRELPLPFAEAETDHAQLVAFLNQYPQGRERLRAAEQAEQAFATVLTAPLTVQRALSEELQVATRTYHAAIRA ALGEGPGTRWRERRLKAVTSALAAVTEGVVLLPLDDLPDLLAELPAARLPDLTGFMPGETSRLRALADRAWQLREDDDLG ALLEALERETGDAVTPRVELDAAAAGIYLAVGDLESARALLERAAHGLTDDLPRSLPGLVLARLGQVRDAQGDRELAQRS YRALLALSYAPAFAREAAEAGLRAPFRLDLA >Mature_350_residues PDPEADAALLELWDLWVRAGDGRMPLTLLPDLGDLLRLHPQFNAGTVVEVLRHLQARGLDVPEVLWASGPDPDHPLRDAL PAAHFLLRELPLPFAEAETDHAQLVAFLNQYPQGRERLRAAEQAEQAFATVLTAPLTVQRALSEELQVATRTYHAAIRAA LGEGPGTRWRERRLKAVTSALAAVTEGVVLLPLDDLPDLLAELPAARLPDLTGFMPGETSRLRALADRAWQLREDDDLGA LLEALERETGDAVTPRVELDAAAAGIYLAVGDLESARALLERAAHGLTDDLPRSLPGLVLARLGQVRDAQGDRELAQRSY RALLALSYAPAFAREAAEAGLRAPFRLDLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38177; Mature: 38046
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPEADAALLELWDLWVRAGDGRMPLTLLPDLGDLLRLHPQFNAGTVVEVLRHLQARGL CCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC DVPEVLWASGPDPDHPLRDALPAAHFLLRELPLPFAEAETDHAQLVAFLNQYPQGRERLR CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH AAEQAEQAFATVLTAPLTVQRALSEELQVATRTYHAAIRAALGEGPGTRWRERRLKAVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ALAAVTEGVVLLPLDDLPDLLAELPAARLPDLTGFMPGETSRLRALADRAWQLREDDDLG HHHHHHCCEEEEECCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH ALLEALERETGDAVTPRVELDAAAAGIYLAVGDLESARALLERAAHGLTDDLPRSLPGLV HHHHHHHHHCCCCCCCCEEHHHHHCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHH LARLGQVRDAQGDRELAQRSYRALLALSYAPAFAREAAEAGLRAPFRLDLA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure PDPEADAALLELWDLWVRAGDGRMPLTLLPDLGDLLRLHPQFNAGTVVEVLRHLQARGL CCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC DVPEVLWASGPDPDHPLRDALPAAHFLLRELPLPFAEAETDHAQLVAFLNQYPQGRERLR CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH AAEQAEQAFATVLTAPLTVQRALSEELQVATRTYHAAIRAALGEGPGTRWRERRLKAVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ALAAVTEGVVLLPLDDLPDLLAELPAARLPDLTGFMPGETSRLRALADRAWQLREDDDLG HHHHHHCCEEEEECCCHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH ALLEALERETGDAVTPRVELDAAAAGIYLAVGDLESARALLERAAHGLTDDLPRSLPGLV HHHHHHHHHCCCCCCCCEEHHHHHCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHH LARLGQVRDAQGDRELAQRSYRALLALSYAPAFAREAAEAGLRAPFRLDLA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA