BacMap

Definition	Deinococcus geothermalis DSM 11300, complete genome.
Accession	NC_008025
Length	2,467,205

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The map label for this gene is yufO [H]

Identifier: 94985474

GI number: 94985474

Start: 1454604

End: 1456205

Strand: Reverse

Name: yufO [H]

Synonym: Dgeo_1374

Alternate gene names: 94985474

Gene position: 1456205-1454604 (Counterclockwise)

Preceding gene: 94985478

Following gene: 94985472

Centisome position: 59.02

GC content: 65.23

Gene sequence:

>1602_bases
ATGACGGTGGCCAACAAGGACGTGCTGCAAGCGGTGCGGCACAACTCCGAATACGCGCTGGAACTGCGGAACATCACCAA
ACGCTTTCCGCTGGTGCTGGCGAACGACAATATCTCTATGCAAGTGCGCTGGGGCAGCGTTCACGCTCTGTGCGGTGAAA
ACGGCGCCGGCAAAAGCACCCTGATGAAGATCGTGTATGGGGCCCAGCCCCCCACCAGCGGCGAGATCGTGGTGGATGGC
CAGCCGGTCCACTTCACCGACCCCTCGCAGGCCATCGCTCACGGCATCGGCATGGTCTTCCAGCACTTCATGCTGGTCGA
TACCCTGACGGTCACCGAGAACGTGATCCTGGGAGCCGAGCCGCGAGCGGGCACCTCCATCGACTATGCCGGGGCGCGCC
GCCGCGTGGCCGAGCTGATCGAGCAGTTCGGCTTTGATCTCAACCCTGACGCGCTCGTGGGCGACCTGCCGGTGGGCCTC
CAGCAGAAGGTGGAAATTCTCAAGACGCTTTACCGCGGCGCGCGCATCTTGATTCTGGACGAGCCGACTGCCGTCCTCAC
ACCGACCGAGACAGACGAACTCTTCGACTTTCTGAAAAATCAGTACGCGGCAAGTGGCAACGCGGTCATTTTCATCAGCC
ACAAGTTGCATGAGGTGCTGCAGATCAGTGACACCATCAGCGTCATCCGTGACGGCAAAATGATCGGCAGCATTCCCGCC
CAGGGCGCGACCACCGAGACCCTGGCCCGGATGATGGTGGGCCGCGACGTGAGCCTGAAGGTGCATAAGGCCCCCGCCCG
GCCCGGCGAGGTGGCCCTCGATGTCCGCAACGTCACTGTCAAGGGTGAACACGGCAACGCCGTGGATGGTGTCTCCTTCC
AGGTCCGTTCGGGCGAAATCGTCGGGATCGCGGGCGTGGAGGGCAACGGCCAGAGCGAGCTGGTGGAGGCGATCACCGGC
CTGCTGCCGGTTGCCAGCGGCGAGATCACCTATCTGGGCCGTCACGCGCGCGGCGTGCGCGAGGTGGAAGCGAGCGGCGT
CTCGCACATCCCGGAGGACCGCAACGAGCGCGGCCTGGTGCTGGAGATGACCACCGCCGAGAACTACATCCTGGGCGAAC
ATGACCGCGCTCCCTTCGCTGGCCCGCTGGGATTCCTGAATCTGGAGGCCATCGAGGAAAATGCCCGCCAGCTCAGTGAG
AAGTACGACGTTCGCCCCCGCAGCGTCAGCCTGCAAGCGGGCCGTTACAGCGGCGGCAACGCCCAGAAGCTGATTGTGGC
GCGCGAGATGCGCAAGCAGCCCAAAATCCTGATCGCCTCGCAGCCTACCCGCGGGGTGGACATCGGCGCCATCGAGTTCA
TCCACGCCCGCATCGTGGAGGCGCGCGACCAGGGCCTCGCCGTGCTGCTCGTCAGTGCCGACCTGGGCGAGGTGATGAAC
CTCTCCGACCGCATCCTGGTGATGTACGAGGGCCGGATCGTGGGTGAGGTGGAGGCCGCCACCGCCACCGAGACGCAGCT
CGGCCTGCTGATGACCGGCAGCGGGGGCACGGGCGGGCGCAGCGGTGCCGTGAGCGACACCCAGGAATACGGCACGCGCT
GA

Upstream 100 bases:

>100_bases
GGCCCAGGTTCGTGACGGCCAGCCAGAACGCTTCCATGTGCGCCCATTGTGACGCCTCTCGCGTTCGGAGGGGAGAGGCG
CCCAGCGGTACACTGAACGT

Downstream 100 bases:

>100_bases
GCACAGGACAAAGAAAAGGGCCGCCTCGCGTAGGGCGGCCTTTTGAATCGAAGAGTGAATCGAAGAGAAGGGCTTACACG
TCTTCGTTGGTTGTACTGAC

Product: ABC transporter related

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTVANKDVLQAVRHNSEYALELRNITKRFPLVLANDNISMQVRWGSVHALCGENGAGKSTLMKIVYGAQPPTSGEIVVDG
QPVHFTDPSQAIAHGIGMVFQHFMLVDTLTVTENVILGAEPRAGTSIDYAGARRRVAELIEQFGFDLNPDALVGDLPVGL
QQKVEILKTLYRGARILILDEPTAVLTPTETDELFDFLKNQYAASGNAVIFISHKLHEVLQISDTISVIRDGKMIGSIPA
QGATTETLARMMVGRDVSLKVHKAPARPGEVALDVRNVTVKGEHGNAVDGVSFQVRSGEIVGIAGVEGNGQSELVEAITG
LLPVASGEITYLGRHARGVREVEASGVSHIPEDRNERGLVLEMTTAENYILGEHDRAPFAGPLGFLNLEAIEENARQLSE
KYDVRPRSVSLQAGRYSGGNAQKLIVAREMRKQPKILIASQPTRGVDIGAIEFIHARIVEARDQGLAVLLVSADLGEVMN
LSDRILVMYEGRIVGEVEAATATETQLGLLMTGSGGTGGRSGAVSDTQEYGTR

Sequences:

>Translated_533_residues
MTVANKDVLQAVRHNSEYALELRNITKRFPLVLANDNISMQVRWGSVHALCGENGAGKSTLMKIVYGAQPPTSGEIVVDG
QPVHFTDPSQAIAHGIGMVFQHFMLVDTLTVTENVILGAEPRAGTSIDYAGARRRVAELIEQFGFDLNPDALVGDLPVGL
QQKVEILKTLYRGARILILDEPTAVLTPTETDELFDFLKNQYAASGNAVIFISHKLHEVLQISDTISVIRDGKMIGSIPA
QGATTETLARMMVGRDVSLKVHKAPARPGEVALDVRNVTVKGEHGNAVDGVSFQVRSGEIVGIAGVEGNGQSELVEAITG
LLPVASGEITYLGRHARGVREVEASGVSHIPEDRNERGLVLEMTTAENYILGEHDRAPFAGPLGFLNLEAIEENARQLSE
KYDVRPRSVSLQAGRYSGGNAQKLIVAREMRKQPKILIASQPTRGVDIGAIEFIHARIVEARDQGLAVLLVSADLGEVMN
LSDRILVMYEGRIVGEVEAATATETQLGLLMTGSGGTGGRSGAVSDTQEYGTR
>Mature_532_residues
TVANKDVLQAVRHNSEYALELRNITKRFPLVLANDNISMQVRWGSVHALCGENGAGKSTLMKIVYGAQPPTSGEIVVDGQ
PVHFTDPSQAIAHGIGMVFQHFMLVDTLTVTENVILGAEPRAGTSIDYAGARRRVAELIEQFGFDLNPDALVGDLPVGLQ
QKVEILKTLYRGARILILDEPTAVLTPTETDELFDFLKNQYAASGNAVIFISHKLHEVLQISDTISVIRDGKMIGSIPAQ
GATTETLARMMVGRDVSLKVHKAPARPGEVALDVRNVTVKGEHGNAVDGVSFQVRSGEIVGIAGVEGNGQSELVEAITGL
LPVASGEITYLGRHARGVREVEASGVSHIPEDRNERGLVLEMTTAENYILGEHDRAPFAGPLGFLNLEAIEENARQLSEK
YDVRPRSVSLQAGRYSGGNAQKLIVAREMRKQPKILIASQPTRGVDIGAIEFIHARIVEARDQGLAVLLVSADLGEVMNL
SDRILVMYEGRIVGEVEAATATETQLGLLMTGSGGTGGRSGAVSDTQEYGTR

Specific function: Involved In The High-Affinity D-Xylose Membrane Transport System. [C]

COG id: COG3845

COG function: function code R; ABC-type uncharacterized transport systems, ATPase components

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=237, Percent_Identity=28.2700421940928, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI47078218, Length=237, Percent_Identity=28.2700421940928, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI31657092, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=28.4313725490196, Blast_Score=87, Evalue=6e-17,
Organism=Homo sapiens, GI27436953, Length=235, Percent_Identity=27.2340425531915, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI21536376, Length=208, Percent_Identity=28.8461538461538, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI27881501, Length=217, Percent_Identity=27.1889400921659, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI30795238, Length=217, Percent_Identity=27.1889400921659, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI116734710, Length=198, Percent_Identity=26.7676767676768, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI27477115, Length=228, Percent_Identity=24.1228070175439, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI150417984, Length=218, Percent_Identity=27.9816513761468, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI62526033, Length=278, Percent_Identity=26.2589928057554, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI27262624, Length=207, Percent_Identity=30.4347826086957, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI27262626, Length=207, Percent_Identity=30.4347826086957, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI171184400, Length=231, Percent_Identity=29.4372294372294, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI42741659, Length=223, Percent_Identity=30.4932735426009, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=241, Percent_Identity=26.1410788381743, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI11967971, Length=211, Percent_Identity=29.3838862559242, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=29.0178571428571, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=29.0178571428571, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789991, Length=498, Percent_Identity=39.3574297188755, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1788472, Length=493, Percent_Identity=34.4827586206897, Blast_Score=306, Evalue=3e-84,
Organism=Escherichia coli, GI1790190, Length=495, Percent_Identity=37.1717171717172, Blast_Score=304, Evalue=7e-84,
Organism=Escherichia coli, GI1788210, Length=491, Percent_Identity=34.4195519348269, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1790525, Length=480, Percent_Identity=33.125, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1788897, Length=486, Percent_Identity=33.5390946502058, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI48995001, Length=489, Percent_Identity=32.9243353783231, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1787792, Length=481, Percent_Identity=34.9272349272349, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI48994943, Length=505, Percent_Identity=25.5445544554455, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1786345, Length=262, Percent_Identity=30.9160305343511, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1786703, Length=183, Percent_Identity=35.5191256830601, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786872, Length=221, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=29.7413793103448, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI87081709, Length=237, Percent_Identity=27.8481012658228, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI87081782, Length=240, Percent_Identity=29.1666666666667, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1787500, Length=217, Percent_Identity=27.1889400921659, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=28.4403669724771, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=29.5454545454545, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=27.9279279279279, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1786253, Length=212, Percent_Identity=30.6603773584906, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=28.4403669724771, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1787105, Length=233, Percent_Identity=31.3304721030043, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788506, Length=510, Percent_Identity=23.5294117647059, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787712, Length=218, Percent_Identity=26.1467889908257, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1789672, Length=233, Percent_Identity=27.4678111587983, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787547, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=27.1889400921659, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI48994883, Length=233, Percent_Identity=30.9012875536481, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI48994997, Length=234, Percent_Identity=29.9145299145299, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787548, Length=250, Percent_Identity=28.4, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788644, Length=235, Percent_Identity=28.0851063829787, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787089, Length=204, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=230, Percent_Identity=25.2173913043478, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787370, Length=201, Percent_Identity=28.8557213930348, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786803, Length=228, Percent_Identity=25.4385964912281, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=26.6375545851528, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1789963, Length=231, Percent_Identity=31.1688311688312, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=25.5144032921811, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082268, Length=224, Percent_Identity=24.1071428571429, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=27.1844660194175, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=30.0448430493274, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787759, Length=240, Percent_Identity=27.9166666666667, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=28.1553398058252, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=221, Percent_Identity=26.2443438914027, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI145693107, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786975, Length=432, Percent_Identity=23.1481481481481, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788053, Length=207, Percent_Identity=27.536231884058, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082267, Length=199, Percent_Identity=24.1206030150754, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789586, Length=210, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=249, Percent_Identity=29.3172690763052, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788540, Length=222, Percent_Identity=28.8288288288288, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=220, Percent_Identity=32.2727272727273, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=208, Percent_Identity=31.25, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=208, Percent_Identity=30.2884615384615, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=204, Percent_Identity=26.9607843137255, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=204, Percent_Identity=26.9607843137255, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=204, Percent_Identity=26.9607843137255, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=225, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=201, Percent_Identity=25.8706467661692, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=243, Percent_Identity=27.1604938271605, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=212, Percent_Identity=31.6037735849057, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=231, Percent_Identity=24.6753246753247, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=225, Percent_Identity=29.7777777777778, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=229, Percent_Identity=26.2008733624454, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321081, Length=245, Percent_Identity=25.7142857142857, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574150, Length=258, Percent_Identity=24.8062015503876, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI116007328, Length=258, Percent_Identity=24.8062015503876, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=26.2672811059908, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=26.2672811059908, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=217, Percent_Identity=22.5806451612903, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24666092, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221512771, Length=227, Percent_Identity=22.4669603524229, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24582014, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24582012, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641565, Length=227, Percent_Identity=28.6343612334802, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397593, Length=223, Percent_Identity=29.1479820627803, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24659289, Length=231, Percent_Identity=25.5411255411255, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 57304; Mature: 57173

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVANKDVLQAVRHNSEYALELRNITKRFPLVLANDNISMQVRWGSVHALCGENGAGKST
CCCCCHHHHHHHHCCCCEEEEHHHHHHHCCEEEECCCEEEEEEECCEEEEECCCCCCHHH
LMKIVYGAQPPTSGEIVVDGQPVHFTDPSQAIAHGIGMVFQHFMLVDTLTVTENVILGAE
HEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PRAGTSIDYAGARRRVAELIEQFGFDLNPDALVGDLPVGLQQKVEILKTLYRGARILILD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEE
EPTAVLTPTETDELFDFLKNQYAASGNAVIFISHKLHEVLQISDTISVIRDGKMIGSIPA
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEECCCC
QGATTETLARMMVGRDVSLKVHKAPARPGEVALDVRNVTVKGEHGNAVDGVSFQVRSGEI
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCE
VGIAGVEGNGQSELVEAITGLLPVASGEITYLGRHARGVREVEASGVSHIPEDRNERGLV
EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHCCHHHHHHCCCCCCCCCCCCCCEE
LEMTTAENYILGEHDRAPFAGPLGFLNLEAIEENARQLSEKYDVRPRSVSLQAGRYSGGN
EEEECCCCEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
AQKLIVAREMRKQPKILIASQPTRGVDIGAIEFIHARIVEARDQGLAVLLVSADLGEVMN
CEEEHEEHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHC
LSDRILVMYEGRIVGEVEAATATETQLGLLMTGSGGTGGRSGAVSDTQEYGTR
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TVANKDVLQAVRHNSEYALELRNITKRFPLVLANDNISMQVRWGSVHALCGENGAGKST
CCCCHHHHHHHHCCCCEEEEHHHHHHHCCEEEECCCEEEEEEECCEEEEECCCCCCHHH
LMKIVYGAQPPTSGEIVVDGQPVHFTDPSQAIAHGIGMVFQHFMLVDTLTVTENVILGAE
HEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
PRAGTSIDYAGARRRVAELIEQFGFDLNPDALVGDLPVGLQQKVEILKTLYRGARILILD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEE
EPTAVLTPTETDELFDFLKNQYAASGNAVIFISHKLHEVLQISDTISVIRDGKMIGSIPA
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEECCCC
QGATTETLARMMVGRDVSLKVHKAPARPGEVALDVRNVTVKGEHGNAVDGVSFQVRSGEI
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCE
VGIAGVEGNGQSELVEAITGLLPVASGEITYLGRHARGVREVEASGVSHIPEDRNERGLV
EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHCCHHHHHHCCCCCCCCCCCCCCEE
LEMTTAENYILGEHDRAPFAGPLGFLNLEAIEENARQLSEKYDVRPRSVSLQAGRYSGGN
EEEECCCCEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
AQKLIVAREMRKQPKILIASQPTRGVDIGAIEFIHARIVEARDQGLAVLLVSADLGEVMN
CEEEHEEHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHC
LSDRILVMYEGRIVGEVEAATATETQLGLLMTGSGGTGGRSGAVSDTQEYGTR
CCCCEEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]