| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972302
Identifier: 94972302
GI number: 94972302
Start: 184808
End: 185944
Strand: Direct
Name: 94972302
Synonym: Dgeo_2839
Alternate gene names: NA
Gene position: 184808-185944 (Clockwise)
Preceding gene: 94972304
Following gene: 94972301
Centisome position: 32.19
GC content: 67.02
Gene sequence:
>1137_bases ATGTTCACCGGGTTTCTCCCTGCCCGCCGCGCGGCTTCTGGCGAGGTGCTGCGCAATTTCACTCCCAACTGGTTCACGGT AACAATGGGTACTGGCATCCTCGCCTTGATGTTGCCGCACCTTCCGCTGGCCGGCGCAGTAAGGCTGGGTGAGGGTCTGT GGTGGCTCAACCTGGGCCTGTTTTTGCTGTTGACCGTGCTGTCGCTGCTGCGGCTGGTGCTGTATCCGCAGGAAAGCCGC GCTACCTTGCGCCATCCGGTCCAGAGCATGTTCCTGGGGGCCGTGCCCATGGGCCTGGCGACCCTGATTAACGGCCTGAT TGTGTTCGGCGTGCCGCAGTGGGGGGCAGCGGCTGCCACGCTCGCCCGGGACCTGTGGGCTTTCGATGCCCTGCTCGCCG CAGTGGTTGGCCTGCTGGTGCCGTATCTGATGTTCACCCGCCAGGATCATGCTCTGGAGCGCATGACCGGCGTGTGGCTG CTGCCGGTGGTCGCCTCGGAGGTGGCCGCTGCCAGCGCTGGTCTGATCGCGCCGCAGCTGCCAGTGGCCGAAGCCTTGCC GCTGCTCTACAGCGGTTATGTGCTGTTCGCGCTGTCGGTGCCGCTCGCCCTGATGATCATCACCGTGCTGGTGCTGCGGC TCGCCCAGCACAAGCTGCCCACCCCTGACCTGGGTGTGAGTATGTTCTTGCCGCTGGGGCCGCTGGCGACCGGCGCGCTG GCCCTGCTGCAACTGGGAGAGGCCGCACCACGCGTGTTGAGCGCGCAGGAGCTGGGCGATCTGGCCCCCACCTTCACCGG CCTAGGGCTGGCGGGCGGGCTGATTCTGTGGGGCTTCGGGGCGTGGTGGCTGGCCCTGGCGACACTGACCACAGGGCGCT TCGTGAGAACCGGGTTGCCTTTCAACCTGGGTTGGTGGGGCCTGACCTTTCCACTGGGAGTCTATACCGCTGCGACCTAT GCCTTGGGGACCCTGACCCGTCTGTCGGCTTTCACAACGCTGGGCCACATTCTGGTGGGCGTCCTGGCCGGGCTGTGGTT CTTGGTTGCTGCGCGCACGCTGCACGGCGCCCTGCGCGGCCACCTTTTCCAGACGCCGCCCGCCGCGCGCGAGACGGGTT TGCCCCGCGTCTCCTGA
Upstream 100 bases:
>100_bases GGTGTTCTGGATTGAGCATCCCTTCTAATATAGAAAAAATTTATGACTCTGGAAAAAGATGCTATTTGACTTGATAATTT CACGATTCTAGGGTGAGGCC
Downstream 100 bases:
>100_bases GGTCCGGTCCGCGGCTGCCACTTTTTCGCCCCAGTTTCTCCCGGAGGTGCTCCTATGGATGATCAGCTCGCCCTCTCCCG CCGCGCCGCCCTGAGCCTGC
Product: C4-dicarboxylate transporter/malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MFTGFLPARRAASGEVLRNFTPNWFTVTMGTGILALMLPHLPLAGAVRLGEGLWWLNLGLFLLLTVLSLLRLVLYPQESR ATLRHPVQSMFLGAVPMGLATLINGLIVFGVPQWGAAAATLARDLWAFDALLAAVVGLLVPYLMFTRQDHALERMTGVWL LPVVASEVAAASAGLIAPQLPVAEALPLLYSGYVLFALSVPLALMIITVLVLRLAQHKLPTPDLGVSMFLPLGPLATGAL ALLQLGEAAPRVLSAQELGDLAPTFTGLGLAGGLILWGFGAWWLALATLTTGRFVRTGLPFNLGWWGLTFPLGVYTAATY ALGTLTRLSAFTTLGHILVGVLAGLWFLVAARTLHGALRGHLFQTPPAARETGLPRVS
Sequences:
>Translated_378_residues MFTGFLPARRAASGEVLRNFTPNWFTVTMGTGILALMLPHLPLAGAVRLGEGLWWLNLGLFLLLTVLSLLRLVLYPQESR ATLRHPVQSMFLGAVPMGLATLINGLIVFGVPQWGAAAATLARDLWAFDALLAAVVGLLVPYLMFTRQDHALERMTGVWL LPVVASEVAAASAGLIAPQLPVAEALPLLYSGYVLFALSVPLALMIITVLVLRLAQHKLPTPDLGVSMFLPLGPLATGAL ALLQLGEAAPRVLSAQELGDLAPTFTGLGLAGGLILWGFGAWWLALATLTTGRFVRTGLPFNLGWWGLTFPLGVYTAATY ALGTLTRLSAFTTLGHILVGVLAGLWFLVAARTLHGALRGHLFQTPPAARETGLPRVS >Mature_378_residues MFTGFLPARRAASGEVLRNFTPNWFTVTMGTGILALMLPHLPLAGAVRLGEGLWWLNLGLFLLLTVLSLLRLVLYPQESR ATLRHPVQSMFLGAVPMGLATLINGLIVFGVPQWGAAAATLARDLWAFDALLAAVVGLLVPYLMFTRQDHALERMTGVWL LPVVASEVAAASAGLIAPQLPVAEALPLLYSGYVLFALSVPLALMIITVLVLRLAQHKLPTPDLGVSMFLPLGPLATGAL ALLQLGEAAPRVLSAQELGDLAPTFTGLGLAGGLILWGFGAWWLALATLTTGRFVRTGLPFNLGWWGLTFPLGVYTAATY ALGTLTRLSAFTTLGHILVGVLAGLWFLVAARTLHGALRGHLFQTPPAARETGLPRVS
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325165, Length=435, Percent_Identity=23.2183908045977, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 40199; Mature: 40199
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00132 CARBOXYPEPT_ZN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTGFLPARRAASGEVLRNFTPNWFTVTMGTGILALMLPHLPLAGAVRLGEGLWWLNLGL CCCCCCCHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH FLLLTVLSLLRLVLYPQESRATLRHPVQSMFLGAVPMGLATLINGLIVFGVPQWGAAAAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHH LARDLWAFDALLAAVVGLLVPYLMFTRQDHALERMTGVWLLPVVASEVAAASAGLIAPQL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVAEALPLLYSGYVLFALSVPLALMIITVLVLRLAQHKLPTPDLGVSMFLPLGPLATGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH ALLQLGEAAPRVLSAQELGDLAPTFTGLGLAGGLILWGFGAWWLALATLTTGRFVRTGLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC FNLGWWGLTFPLGVYTAATYALGTLTRLSAFTTLGHILVGVLAGLWFLVAARTLHGALRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HLFQTPPAARETGLPRVS CCCCCCCCHHHCCCCCCC >Mature Secondary Structure MFTGFLPARRAASGEVLRNFTPNWFTVTMGTGILALMLPHLPLAGAVRLGEGLWWLNLGL CCCCCCCHHHCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH FLLLTVLSLLRLVLYPQESRATLRHPVQSMFLGAVPMGLATLINGLIVFGVPQWGAAAAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHH LARDLWAFDALLAAVVGLLVPYLMFTRQDHALERMTGVWLLPVVASEVAAASAGLIAPQL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PVAEALPLLYSGYVLFALSVPLALMIITVLVLRLAQHKLPTPDLGVSMFLPLGPLATGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH ALLQLGEAAPRVLSAQELGDLAPTFTGLGLAGGLILWGFGAWWLALATLTTGRFVRTGLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC FNLGWWGLTFPLGVYTAATYALGTLTRLSAFTTLGHILVGVLAGLWFLVAARTLHGALRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HLFQTPPAARETGLPRVS CCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]