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The map label for this gene is ycjN [C]

Identifier: 94972284

GI number: 94972284

Start: 206750

End: 208036

Strand: Direct

Name: ycjN [C]

Synonym: Dgeo_2821

Alternate gene names: 94972284

Gene position: 206750-208036 (Clockwise)

Preceding gene: 94972285

Following gene: 94972283

Centisome position: 36.01

GC content: 58.82

Gene sequence:

>1287_bases
ATGCGTCGCCTGACTCTGCTGTTTGCCCTGCCCGGTCTACTGGTCGCTGTGCCTGCCCATGCCCAGAGTGTCGACTGGAG
CGCCTGTAAGGGCACAACCCTGCGTGTGCTGCTCAACCAGCATCCCTGGACAACCGCGATGCAGCCCGCCTTTCCAGAAT
TTGAAAAGCTGACCGGGATGAAGCTGGCGGTAGAAACCTATCCTGAGGCGCAGTTCCGGCAAAAAGTCTTGGTGGAACTC
TCCACCGGGGGGCAGAATCTCGACGCCTTTATGCTCTCGCCGGGCCAGGAAGGGCTGCTGTATGCCCGTAGCGGCTGGAT
CGAGGACATGAAAACGTATATCAACAATAAGAATTTGACTGCCGGAAACTGGGGCTTTTCTGACTTCTATCCCTCGGTTG
TGCGGTCCACCGAGTACAACGGAATCATGACGGGTGTGCCGATCCAAACGGAAACACCGATGCTGTTCTATCGCAAGGAT
CTATTTACCAAGTACAAGATTCCAGTGCCCAAGACTATGGCCCAGCTCGAGGCTGCGGCCAAAGCCCTTCATGGCAAAGA
CGGCGTCTTTGGAATTGCTCTCCGTGGCAAGGGTGCGGCGGCCACCAGCCAGTTCAGCCCCTACATGTTCTCCTATGGCA
GCACTTGGCTGAACAAAGATGGCCAAGCCAACTTTACCGATCCCAAGTTTGTGCAGGCCATGACGATGTACACCGGCTTG
CTGCGCAAGTACGGCCCGCCAGCTGCCGTGACGATGAGTTGGCCAGAGGTCACCAACCTCTTCGCGCAGGGCAAGGTCGC
CATGTTCACCGACGCCTCGCTGTTTCGCAGCATTGTGGACGATCCCAAAAGCAGCACGGTGGCCGGGAAGGTCGGTTATG
CGCCATTCCCCGCTGGACCGGCCGGACGCAAGCCCTATGTGACCACTTGGGCCCTGAGTATCCCCAAGGGCAGCAAGAAC
AAGCCGTGCGCTTGGCTGTTTACCCAGTGGGCCACCAACCGCCAAAACCAGTTGCGCGTGCTGCTTCAGGATGTGCCCGC
TGTACGGCGCAGCGTCTGGAACGACCCAGCTTTCAAAAAGCAGGAAACCAACCCCGAGTGGACCCAGGCTCACCTCAGTC
AGTTGGCCAGTGCCAACCCGCTGTGGAATCCCCCGGTCAGCCAGGTTGGCGAGGTGCGCGATGCGCTGGGTCAGGCCATC
GTGGGGATCTTGCAGGGCGGTAACACCCTAGACCTGCTCAAGCGTGCCGAGCAGACCACCAACGCGATCATCAGCAAGGA
AAAGTAA

Upstream 100 bases:

>100_bases
ATCTCTCTGAGCGGCTCTCGCGCGCAGCCGCAGCCCGGCGCGCCCTCAACGCTGAGCCTTCCCCCTAACCCCCGCCTCTC
ACCCCCTAAGGAGATCCTGT

Downstream 100 bases:

>100_bases
TCCATGACCTCGGCCCCCACCCAGACCCGGGGGCAGCTGCGGTCAGGCGGAGGCTTCTCCGCCTGGCTGGACCGGAACAT
CCGTTGGGTGTTCCCGCTGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRRLTLLFALPGLLVAVPAHAQSVDWSACKGTTLRVLLNQHPWTTAMQPAFPEFEKLTGMKLAVETYPEAQFRQKVLVEL
STGGQNLDAFMLSPGQEGLLYARSGWIEDMKTYINNKNLTAGNWGFSDFYPSVVRSTEYNGIMTGVPIQTETPMLFYRKD
LFTKYKIPVPKTMAQLEAAAKALHGKDGVFGIALRGKGAAATSQFSPYMFSYGSTWLNKDGQANFTDPKFVQAMTMYTGL
LRKYGPPAAVTMSWPEVTNLFAQGKVAMFTDASLFRSIVDDPKSSTVAGKVGYAPFPAGPAGRKPYVTTWALSIPKGSKN
KPCAWLFTQWATNRQNQLRVLLQDVPAVRRSVWNDPAFKKQETNPEWTQAHLSQLASANPLWNPPVSQVGEVRDALGQAI
VGILQGGNTLDLLKRAEQTTNAIISKEK

Sequences:

>Translated_428_residues
MRRLTLLFALPGLLVAVPAHAQSVDWSACKGTTLRVLLNQHPWTTAMQPAFPEFEKLTGMKLAVETYPEAQFRQKVLVEL
STGGQNLDAFMLSPGQEGLLYARSGWIEDMKTYINNKNLTAGNWGFSDFYPSVVRSTEYNGIMTGVPIQTETPMLFYRKD
LFTKYKIPVPKTMAQLEAAAKALHGKDGVFGIALRGKGAAATSQFSPYMFSYGSTWLNKDGQANFTDPKFVQAMTMYTGL
LRKYGPPAAVTMSWPEVTNLFAQGKVAMFTDASLFRSIVDDPKSSTVAGKVGYAPFPAGPAGRKPYVTTWALSIPKGSKN
KPCAWLFTQWATNRQNQLRVLLQDVPAVRRSVWNDPAFKKQETNPEWTQAHLSQLASANPLWNPPVSQVGEVRDALGQAI
VGILQGGNTLDLLKRAEQTTNAIISKEK
>Mature_428_residues
MRRLTLLFALPGLLVAVPAHAQSVDWSACKGTTLRVLLNQHPWTTAMQPAFPEFEKLTGMKLAVETYPEAQFRQKVLVEL
STGGQNLDAFMLSPGQEGLLYARSGWIEDMKTYINNKNLTAGNWGFSDFYPSVVRSTEYNGIMTGVPIQTETPMLFYRKD
LFTKYKIPVPKTMAQLEAAAKALHGKDGVFGIALRGKGAAATSQFSPYMFSYGSTWLNKDGQANFTDPKFVQAMTMYTGL
LRKYGPPAAVTMSWPEVTNLFAQGKVAMFTDASLFRSIVDDPKSSTVAGKVGYAPFPAGPAGRKPYVTTWALSIPKGSKN
KPCAWLFTQWATNRQNQLRVLLQDVPAVRRSVWNDPAFKKQETNPEWTQAHLSQLASANPLWNPPVSQVGEVRDALGQAI
VGILQGGNTLDLLKRAEQTTNAIISKEK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47225; Mature: 47225

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLTLLFALPGLLVAVPAHAQSVDWSACKGTTLRVLLNQHPWTTAMQPAFPEFEKLTGM
CCEEEEHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCC
KLAVETYPEAQFRQKVLVELSTGGQNLDAFMLSPGQEGLLYARSGWIEDMKTYINNKNLT
EEEEECCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCC
AGNWGFSDFYPSVVRSTEYNGIMTGVPIQTETPMLFYRKDLFTKYKIPVPKTMAQLEAAA
CCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHEEEHHHHHEECCCCCHHHHHHHHHH
KALHGKDGVFGIALRGKGAAATSQFSPYMFSYGSTWLNKDGQANFTDPKFVQAMTMYTGL
HHHCCCCCEEEEEEECCCCCCCCCCCCHHEECCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LRKYGPPAAVTMSWPEVTNLFAQGKVAMFTDASLFRSIVDDPKSSTVAGKVGYAPFPAGP
HHHCCCCCEEEECCHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCEECCCCCCCCCCCC
AGRKPYVTTWALSIPKGSKNKPCAWLFTQWATNRQNQLRVLLQDVPAVRRSVWNDPAFKK
CCCCCEEEEEEEECCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QETNPEWTQAHLSQLASANPLWNPPVSQVGEVRDALGQAIVGILQGGNTLDLLKRAEQTT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAIISKEK
HHHHCCCC
>Mature Secondary Structure
MRRLTLLFALPGLLVAVPAHAQSVDWSACKGTTLRVLLNQHPWTTAMQPAFPEFEKLTGM
CCEEEEHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCC
KLAVETYPEAQFRQKVLVELSTGGQNLDAFMLSPGQEGLLYARSGWIEDMKTYINNKNLT
EEEEECCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCC
AGNWGFSDFYPSVVRSTEYNGIMTGVPIQTETPMLFYRKDLFTKYKIPVPKTMAQLEAAA
CCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHEEEHHHHHEECCCCCHHHHHHHHHH
KALHGKDGVFGIALRGKGAAATSQFSPYMFSYGSTWLNKDGQANFTDPKFVQAMTMYTGL
HHHCCCCCEEEEEEECCCCCCCCCCCCHHEECCCHHCCCCCCCCCCCHHHHHHHHHHHHH
LRKYGPPAAVTMSWPEVTNLFAQGKVAMFTDASLFRSIVDDPKSSTVAGKVGYAPFPAGP
HHHCCCCCEEEECCHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCEECCCCCCCCCCCC
AGRKPYVTTWALSIPKGSKNKPCAWLFTQWATNRQNQLRVLLQDVPAVRRSVWNDPAFKK
CCCCCEEEEEEEECCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QETNPEWTQAHLSQLASANPLWNPPVSQVGEVRDALGQAIVGILQGGNTLDLLKRAEQTT
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NAIISKEK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA