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The map label for this gene is fdhD [H]

Identifier: 94972211

GI number: 94972211

Start: 282387

End: 283142

Strand: Direct

Name: fdhD [H]

Synonym: Dgeo_2744

Alternate gene names: 94972211

Gene position: 282387-283142 (Clockwise)

Preceding gene: 94972212

Following gene: 94972207

Centisome position: 49.19

GC content: 69.18

Gene sequence:

>756_bases
ATGCGAGGGGACGAGGAGCAGCCCGTCGCAGTCACCATGCGGACGCCCGGCGCGGACCACGAGCTGGCGCTGGGCTATCT
GTACGCCGAGGGGGTCATCGGGAGCGCCGACGACGTGCTGGACCTGTCCACGTGGCGGCAGGGTGAGCTGACTGCTCCCA
ACGTGCTGCGGGTAGAGCTGCGCTCCGGCTTTGAGGCGCTGGAAAGGCTCTCGCGTCACACCTTCACCAGCAGCGCTTGT
GGCGTGTGCGGCACGGGCAGCATCGAGCGGCTGGCCTTGAGAGCGCGGCCTGCCCTCTGGAATGAGCCGCCGCTCGCCCC
GGAGGTGATCTGCGGCCTGCCAGGGCGGCTGCGGATGGAACAGCCTCTCTTCGCGGCCACCGGCGGGCTGCACGCAGCGG
GCCTCTTTACTGCCTCGGGCACGTGTCTGGCCGTGCGCGAGGACGTAGGCCGCCACAATGCAGTGGACAAGCTGATCGGC
TGGGCGCTGGCGCGAGGCCTGCTGCCCCTGTCGAACCACCTGCTCGCGGTCAGCAGCCGCGCGGGGTTTGAGATTGTGCA
GAAAGCCGCACTGGCCGGGCTGCCTGTGGTCTGCGCCGTATCGGCTCCCACCAGCCTTGCCGCCGAGGTTGCCGCGAGCT
TCGGCATCACGCTGGTGGGCTTTGTGCGGGAAGGGCGCTTCAATGTCTACAGCTTTCCCGAGCGCCTGCGCCTGAAGGAA
CAGGGCATTTCCGGCGGCCAGCCGCCTCCCTCCTGA

Upstream 100 bases:

>100_bases
ACCCAGGCCCTCCATCCAGCCCATCCTGCGCTACGCCAGGGGCGAGGCCAGCACCGAGACGGACCTCCTGGCGATTGAGG
AACCGCTCGAACTCCGGCTG

Downstream 100 bases:

>100_bases
CTCAGGGCTGCACGATGTTGCTCCGTCTCCGTTTCTTGTCCCTGTCCCAGGCATCCGGCGGCTGGCCGTCCCTGCGCGGA
ATCTGGGACTGCGCCCCTAC

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRGDEEQPVAVTMRTPGADHELALGYLYAEGVIGSADDVLDLSTWRQGELTAPNVLRVELRSGFEALERLSRHTFTSSAC
GVCGTGSIERLALRARPALWNEPPLAPEVICGLPGRLRMEQPLFAATGGLHAAGLFTASGTCLAVREDVGRHNAVDKLIG
WALARGLLPLSNHLLAVSSRAGFEIVQKAALAGLPVVCAVSAPTSLAAEVAASFGITLVGFVREGRFNVYSFPERLRLKE
QGISGGQPPPS

Sequences:

>Translated_251_residues
MRGDEEQPVAVTMRTPGADHELALGYLYAEGVIGSADDVLDLSTWRQGELTAPNVLRVELRSGFEALERLSRHTFTSSAC
GVCGTGSIERLALRARPALWNEPPLAPEVICGLPGRLRMEQPLFAATGGLHAAGLFTASGTCLAVREDVGRHNAVDKLIG
WALARGLLPLSNHLLAVSSRAGFEIVQKAALAGLPVVCAVSAPTSLAAEVAASFGITLVGFVREGRFNVYSFPERLRLKE
QGISGGQPPPS
>Mature_251_residues
MRGDEEQPVAVTMRTPGADHELALGYLYAEGVIGSADDVLDLSTWRQGELTAPNVLRVELRSGFEALERLSRHTFTSSAC
GVCGTGSIERLALRARPALWNEPPLAPEVICGLPGRLRMEQPLFAATGGLHAAGLFTASGTCLAVREDVGRHNAVDKLIG
WALARGLLPLSNHLLAVSSRAGFEIVQKAALAGLPVVCAVSAPTSLAAEVAASFGITLVGFVREGRFNVYSFPERLRLKE
QGISGGQPPPS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=244, Percent_Identity=34.8360655737705, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 26535; Mature: 26535

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDEEQPVAVTMRTPGADHELALGYLYAEGVIGSADDVLDLSTWRQGELTAPNVLRVEL
CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEHHH
RSGFEALERLSRHTFTSSACGVCGTGSIERLALRARPALWNEPPLAPEVICGLPGRLRME
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
QPLFAATGGLHAAGLFTASGTCLAVREDVGRHNAVDKLIGWALARGLLPLSNHLLAVSSR
CCHHHHCCCCCEEEEEECCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
AGFEIVQKAALAGLPVVCAVSAPTSLAAEVAASFGITLVGFVREGRFNVYSFPERLRLKE
CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCEECCHHHHHHHH
QGISGGQPPPS
CCCCCCCCCCC
>Mature Secondary Structure
MRGDEEQPVAVTMRTPGADHELALGYLYAEGVIGSADDVLDLSTWRQGELTAPNVLRVEL
CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEHHH
RSGFEALERLSRHTFTSSACGVCGTGSIERLALRARPALWNEPPLAPEVICGLPGRLRME
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
QPLFAATGGLHAAGLFTASGTCLAVREDVGRHNAVDKLIGWALARGLLPLSNHLLAVSSR
CCHHHHCCCCCEEEEEECCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
AGFEIVQKAALAGLPVVCAVSAPTSLAAEVAASFGITLVGFVREGRFNVYSFPERLRLKE
CCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCEECCHHHHHHHH
QGISGGQPPPS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]