| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971819
Identifier: 94971819
GI number: 94971819
Start: 142397
End: 144097
Strand: Direct
Name: 94971819
Synonym: Dgeo_2350
Alternate gene names: NA
Gene position: 142397-144097 (Clockwise)
Preceding gene: 94971820
Following gene: 94971818
Centisome position: 24.8
GC content: 75.07
Gene sequence:
>1701_bases ATGATCCCGCTGTACCCCCTCTCCGCGGTTGCCCATCAGCCGGACCTGCGCCTGGCCCTGTCGTTGCTCGCCGTCTCGCC CGACATCGGCGGTGTTCTGATTCGTGGGGACCGGGGCGCGGCCAAAAGCACCGCAGCCCGCGGTCTGGCCGCCCTGCTCC CCGCCGCACCGGACGGCACGCCCGCTCCCTTCGTGAGCCTGCCCCTGGGGGCGACCGAAGACCGTGTGGTGGGCACCCTC GACCTCGAGGCGGCGCTGCGCGGCGAGGTGCGCCTCCAGCCGGGCCTGTTGGCCCAGGCTGACGGCGGCGTCTTGTATAT CGACGAGGTGAACCTGCTGGCCGACCATCTGGTGGACGTGCTGCTCGACGTGGCCGCCATGGGGGTCAACCGGGTGCAGC GCGACGGCCTGAGCGCCGAGCATCCCGCCCGCCTCGCCCTGGTGGGCAGCATGAACCCGGAAGAGGGCAGCCTACGCCCG CAATTCCTGGACCGCTTCGGCCTGTGCGTGGAGGTGCAGGCACCGACCGCGGCCGCCGAACGTGCCGAGATCGTCCGCCG CCGCATGGCCTTTGAGGCGGATCCCGCCGCCTTTCTGGCCACCTGGCGGGCCGAGGAGGAGGCCCTGGCCGCCCGCCTCG CCGCCGCCCGCGAACGGCTGCCGCGCGTGCGTGTGCCCGATGCGCTGCTGGACACCATCGCCACCCTGAGCGCCGAGGCG GGGGTGCGGAGCCTGCGGGCCGACCTGGTGCTGTACCGGGCGGCCCGCGCCCTGGCTGCTCTGGAAGGGCGCGAGGAGGT CCAGCACGAGGACCTCTCCCGAGTTGCTCCCCTTGTCCTGGCGCACCGCCGTGACCCCCACCTGCCGCCCCCCCCGCCCA CGTCGCCACCCGCCGCGCCGCCTCCCGAACAGCCCCCGGACCACGGCGCTGGCCCGCAGGACACCCCCGAGGACATCCTC GCGCCGACCCCGCCCGCCGCGCCCTTGCCCTTGTCACCGCTTGCCGCTGTGGGTTCCCGCCGGGGAGGAGCGGGTGGGCC AGGCCGCGTGGTGAGCAGTGTGCCTGATCCCCACCCTGCAGCCCTGGCGGTGCCGGCCACCCTGCGCGCGGCCCTGACTC GCGTTGCGACGGGGGCAGGCCCGGCGGCCCTGACCCGCGGGGATTTCCATGCCCCCGTGCGCGAGGAGGTCGCGGGCCGC CGCGTGCTCTTCGTTGCGGACGCGAGCGGCAGCATGGGCACCCGCGAACGCATGGGGGCGGTCAAGGGCGCGATGCTGGC GGTGTTGAGCGAACAGGGGCGGCGCGACCGCGTGGCGCTGATCACCTTTCGGGGTGCGGGGGCGACCCTGGCGTTGGACT TCACGACGGACGCCGCCGCTGCCGAGGCGGCCATCACCGCCGCGCCCACCGGGGGCCGCACGCCCCTCGCGCACGCGTTG AGGCTGGCCGCCGACGTGCTGGCCGGCGAGCCGCAGGCCCAGCTCGTCCTCTTGACCGATGGTCGCGCCAATGTGCCCCT CACGCCCGGCGGCGACGCTTGGGCCGAGGCCCTCCAGATGGCCCGCGCCCTGCGTCAGGCCCTGCGGGGCGCGCCCGCCT TGGTTGTGGATACAGAGACCGGTCATGTGCGCCTGGGCCGCGCGGCGCAGCTGGCCCAGGCTCTGGGCGCCGCAGTGACC ACCCTGGGAGGCCCGCAGTGA
Upstream 100 bases:
>100_bases TGGCCGGGTTGCGCCCCCACCTCACGCCAAACGGTGCGGGTTGGCGCTACCGCTGGTCCTTTGAGGTTCACGTGTTGCAT GTTCGTCTGGGGGAGCGCCC
Downstream 100 bases:
>100_bases ACCGTCTCGTCCTCGCCGCGCCGCACTCGGGGAGCGGCAAGACCACCGTGGCGTCCCTGCTCTGCCTCGCGCTGCGGCAG CGTGGCCTTCGTGTGGCCCC
Product: magnesium chelatase, ChlI subunit
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MIPLYPLSAVAHQPDLRLALSLLAVSPDIGGVLIRGDRGAAKSTAARGLAALLPAAPDGTPAPFVSLPLGATEDRVVGTL DLEAALRGEVRLQPGLLAQADGGVLYIDEVNLLADHLVDVLLDVAAMGVNRVQRDGLSAEHPARLALVGSMNPEEGSLRP QFLDRFGLCVEVQAPTAAAERAEIVRRRMAFEADPAAFLATWRAEEEALAARLAAARERLPRVRVPDALLDTIATLSAEA GVRSLRADLVLYRAARALAALEGREEVQHEDLSRVAPLVLAHRRDPHLPPPPPTSPPAAPPPEQPPDHGAGPQDTPEDIL APTPPAAPLPLSPLAAVGSRRGGAGGPGRVVSSVPDPHPAALAVPATLRAALTRVATGAGPAALTRGDFHAPVREEVAGR RVLFVADASGSMGTRERMGAVKGAMLAVLSEQGRRDRVALITFRGAGATLALDFTTDAAAAEAAITAAPTGGRTPLAHAL RLAADVLAGEPQAQLVLLTDGRANVPLTPGGDAWAEALQMARALRQALRGAPALVVDTETGHVRLGRAAQLAQALGAAVT TLGGPQ
Sequences:
>Translated_566_residues MIPLYPLSAVAHQPDLRLALSLLAVSPDIGGVLIRGDRGAAKSTAARGLAALLPAAPDGTPAPFVSLPLGATEDRVVGTL DLEAALRGEVRLQPGLLAQADGGVLYIDEVNLLADHLVDVLLDVAAMGVNRVQRDGLSAEHPARLALVGSMNPEEGSLRP QFLDRFGLCVEVQAPTAAAERAEIVRRRMAFEADPAAFLATWRAEEEALAARLAAARERLPRVRVPDALLDTIATLSAEA GVRSLRADLVLYRAARALAALEGREEVQHEDLSRVAPLVLAHRRDPHLPPPPPTSPPAAPPPEQPPDHGAGPQDTPEDIL APTPPAAPLPLSPLAAVGSRRGGAGGPGRVVSSVPDPHPAALAVPATLRAALTRVATGAGPAALTRGDFHAPVREEVAGR RVLFVADASGSMGTRERMGAVKGAMLAVLSEQGRRDRVALITFRGAGATLALDFTTDAAAAEAAITAAPTGGRTPLAHAL RLAADVLAGEPQAQLVLLTDGRANVPLTPGGDAWAEALQMARALRQALRGAPALVVDTETGHVRLGRAAQLAQALGAAVT TLGGPQ >Mature_566_residues MIPLYPLSAVAHQPDLRLALSLLAVSPDIGGVLIRGDRGAAKSTAARGLAALLPAAPDGTPAPFVSLPLGATEDRVVGTL DLEAALRGEVRLQPGLLAQADGGVLYIDEVNLLADHLVDVLLDVAAMGVNRVQRDGLSAEHPARLALVGSMNPEEGSLRP QFLDRFGLCVEVQAPTAAAERAEIVRRRMAFEADPAAFLATWRAEEEALAARLAAARERLPRVRVPDALLDTIATLSAEA GVRSLRADLVLYRAARALAALEGREEVQHEDLSRVAPLVLAHRRDPHLPPPPPTSPPAAPPPEQPPDHGAGPQDTPEDIL APTPPAAPLPLSPLAAVGSRRGGAGGPGRVVSSVPDPHPAALAVPATLRAALTRVATGAGPAALTRGDFHAPVREEVAGR RVLFVADASGSMGTRERMGAVKGAMLAVLSEQGRRDRVALITFRGAGATLALDFTTDAAAAEAAITAAPTGGRTPLAHAL RLAADVLAGEPQAQLVLLTDGRANVPLTPGGDAWAEALQMARALRQALRGAPALVVDTETGHVRLGRAAQLAQALGAAVT TLGGPQ
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 58331; Mature: 58331
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLYPLSAVAHQPDLRLALSLLAVSPDIGGVLIRGDRGAAKSTAARGLAALLPAAPDGT CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCC PAPFVSLPLGATEDRVVGTLDLEAALRGEVRLQPGLLAQADGGVLYIDEVNLLADHLVDV CCCEEEECCCCCCCCEEEEEEHHHHHCCCEEECCCCEEECCCCEEEEECHHHHHHHHHHH LLDVAAMGVNRVQRDGLSAEHPARLALVGSMNPEEGSLRPQFLDRFGLCVEVQAPTAAAE HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCHHHH RAEIVRRRMAFEADPAAFLATWRAEEEALAARLAAARERLPRVRVPDALLDTIATLSAEA HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVRSLRADLVLYRAARALAALEGREEVQHEDLSRVAPLVLAHRRDPHLPPPPPTSPPAAP HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPEQPPDHGAGPQDTPEDILAPTPPAAPLPLSPLAAVGSRRGGAGGPGRVVSSVPDPHPA CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCC ALAVPATLRAALTRVATGAGPAALTRGDFHAPVREEVAGRRVLFVADASGSMGTRERMGA EEECHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHH VKGAMLAVLSEQGRRDRVALITFRGAGATLALDFTTDAAAAEAAITAAPTGGRTPLAHAL HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHEEEECCCCCCCHHHHHH RLAADVLAGEPQAQLVLLTDGRANVPLTPGGDAWAEALQMARALRQALRGAPALVVDTET HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC GHVRLGRAAQLAQALGAAVTTLGGPQ CCEEECHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPLYPLSAVAHQPDLRLALSLLAVSPDIGGVLIRGDRGAAKSTAARGLAALLPAAPDGT CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCC PAPFVSLPLGATEDRVVGTLDLEAALRGEVRLQPGLLAQADGGVLYIDEVNLLADHLVDV CCCEEEECCCCCCCCEEEEEEHHHHHCCCEEECCCCEEECCCCEEEEECHHHHHHHHHHH LLDVAAMGVNRVQRDGLSAEHPARLALVGSMNPEEGSLRPQFLDRFGLCVEVQAPTAAAE HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCHHHH RAEIVRRRMAFEADPAAFLATWRAEEEALAARLAAARERLPRVRVPDALLDTIATLSAEA HHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GVRSLRADLVLYRAARALAALEGREEVQHEDLSRVAPLVLAHRRDPHLPPPPPTSPPAAP HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPEQPPDHGAGPQDTPEDILAPTPPAAPLPLSPLAAVGSRRGGAGGPGRVVSSVPDPHPA CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCC ALAVPATLRAALTRVATGAGPAALTRGDFHAPVREEVAGRRVLFVADASGSMGTRERMGA EEECHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHH VKGAMLAVLSEQGRRDRVALITFRGAGATLALDFTTDAAAAEAAITAAPTGGRTPLAHAL HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHEEEECCCCCCCHHHHHH RLAADVLAGEPQAQLVLLTDGRANVPLTPGGDAWAEALQMARALRQALRGAPALVVDTET HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC GHVRLGRAAQLAQALGAAVTTLGGPQ CCEEECHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]