Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 94312783

GI number: 94312783

Start: 397664

End: 398485

Strand: Direct

Name: metQ [H]

Synonym: Rmet_3855

Alternate gene names: 94312783

Gene position: 397664-398485 (Clockwise)

Preceding gene: 94312782

Following gene: 94312784

Centisome position: 15.41

GC content: 63.02

Gene sequence:

>822_bases
ATGAAACGACGCTCCGCACTTGCTTCCCTGGCAGCCCTGGCCATCGCGCTGCCCGCATTCTCCATCGGCACCGTCCACGC
CCAAACGACGGGCAAGCCCCTCAAGGTGGGCGTGCGCGGCGGAGTCGATGAAGAAATCTGGGAAGTTGTCACGCGCGAGG
CCGCGAAGAACGGCCTGAAGGTGGAGCCCGTGATCATCACGGGCACCGCCAGCCCGAACGAGGCGCTGAACAATGGTGAC
CTCGATGCCAACTCGTTCCAGCACATCCCGTTCCTGCGTGATCAGATCCGCCAGCGCGGCTACAAGATCGTCAACGTCGG
CACCACGCTGATCTCGCCGATCGCCTTCTACTCGCGCAAGGTCAAGTCGCTGGAAGCGCTGCCGAACGGCGCGCGCATCG
GCATTCCGAACGACCCGAGCAATCAGACCCGCGCGCTGGTCATCCTGCGCGATCACGGTCTTGTCAAGCTCAAGGACGGT
TTCGATCCGTCCACGGGCACGGCATCGCTGGCGGACATCACGGCCAACCCGCGCAAGCTCGATCTCGTTGAAAGCGCGTC
GGTGGTGCTGCCGCGCGCGCTGCCCGATCTCGATGCCGCAGCCATCATCAACACGTTCGCGTACCAGGCCGGGCTGATTT
CCTCGCGCGACGGCATTGCCGTCGAAAAGCGGGAGAACAATCCCTACGTCAATGTGATCGCGGTGCGCGAGAAGGACAGG
AACGCGCCGTGGGTCGCAACGCTCGTGAAGTCATATCAGTCCGACGCCGTGCGCAAGTTCATCCTGACCAAGTATCAGGG
ATCGATCATCCCGGCATTCTGA

Upstream 100 bases:

>100_bases
TCGTCGCCGTACTTTGCATTTGCTACCTCGTATTCCTTCTTGGACCCGCGGCAGCGGCCTTCATAGACTGGTGCTTCCCA
ATACTTCCGCACCTTGCTCC

Downstream 100 bases:

>100_bases
CGAGGGAGACTAGCAATGCACACCGTATCCCAGTTGCACGCGCGCGATTCCCATATCGTGTTCGAGCAGGTTGGCAAGAC
CTATCCCGGCGCGGCGACGC

Product: DL-methionine transporter subunit

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKRRSALASLAALAIALPAFSIGTVHAQTTGKPLKVGVRGGVDEEIWEVVTREAAKNGLKVEPVIITGTASPNEALNNGD
LDANSFQHIPFLRDQIRQRGYKIVNVGTTLISPIAFYSRKVKSLEALPNGARIGIPNDPSNQTRALVILRDHGLVKLKDG
FDPSTGTASLADITANPRKLDLVESASVVLPRALPDLDAAAIINTFAYQAGLISSRDGIAVEKRENNPYVNVIAVREKDR
NAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF

Sequences:

>Translated_273_residues
MKRRSALASLAALAIALPAFSIGTVHAQTTGKPLKVGVRGGVDEEIWEVVTREAAKNGLKVEPVIITGTASPNEALNNGD
LDANSFQHIPFLRDQIRQRGYKIVNVGTTLISPIAFYSRKVKSLEALPNGARIGIPNDPSNQTRALVILRDHGLVKLKDG
FDPSTGTASLADITANPRKLDLVESASVVLPRALPDLDAAAIINTFAYQAGLISSRDGIAVEKRENNPYVNVIAVREKDR
NAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF
>Mature_273_residues
MKRRSALASLAALAIALPAFSIGTVHAQTTGKPLKVGVRGGVDEEIWEVVTREAAKNGLKVEPVIITGTASPNEALNNGD
LDANSFQHIPFLRDQIRQRGYKIVNVGTTLISPIAFYSRKVKSLEALPNGARIGIPNDPSNQTRALVILRDHGLVKLKDG
FDPSTGTASLADITANPRKLDLVESASVVLPRALPDLDAAAIINTFAYQAGLISSRDGIAVEKRENNPYVNVIAVREKDR
NAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=239, Percent_Identity=44.3514644351464, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790093, Length=252, Percent_Identity=40.8730158730159, Blast_Score=181, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29444; Mature: 29444

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSALASLAALAIALPAFSIGTVHAQTTGKPLKVGVRGGVDEEIWEVVTREAAKNGLK
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCE
VEPVIITGTASPNEALNNGDLDANSFQHIPFLRDQIRQRGYKIVNVGTTLISPIAFYSRK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH
VKSLEALPNGARIGIPNDPSNQTRALVILRDHGLVKLKDGFDPSTGTASLADITANPRKL
HHHHHHCCCCCEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCCEE
DLVESASVVLPRALPDLDAAAIINTFAYQAGLISSRDGIAVEKRENNPYVNVIAVREKDR
EHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCC
NAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
>Mature Secondary Structure
MKRRSALASLAALAIALPAFSIGTVHAQTTGKPLKVGVRGGVDEEIWEVVTREAAKNGLK
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCE
VEPVIITGTASPNEALNNGDLDANSFQHIPFLRDQIRQRGYKIVNVGTTLISPIAFYSRK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH
VKSLEALPNGARIGIPNDPSNQTRALVILRDHGLVKLKDGFDPSTGTASLADITANPRKL
HHHHHHCCCCCEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCCEE
DLVESASVVLPRALPDLDAAAIINTFAYQAGLISSRDGIAVEKRENNPYVNVIAVREKDR
EHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCC
NAPWVATLVKSYQSDAVRKFILTKYQGSIIPAF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]