Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
---|---|
Accession | NC_007974 |
Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94312758
Identifier: 94312758
GI number: 94312758
Start: 370229
End: 370903
Strand: Direct
Name: 94312758
Synonym: Rmet_3828
Alternate gene names: NA
Gene position: 370229-370903 (Clockwise)
Preceding gene: 94312757
Following gene: 94312759
Centisome position: 14.35
GC content: 63.41
Gene sequence:
>675_bases GTGAGCGACGGCCGGCGCACTGCCCCGCGCGGCCGGGGCGGGCTGCTAAACTTCACCGCGAAACACTGTCCATCTGCATT CAACGTGAACCTGTCCAACCTGGAACGCCAGCTTTCCTTCCTCCGGGAAATCGACCTGTTGAAGAGCGTCGTCCGGATGA CACCGCTTATCAATCAGTCACGCCGTGAGAACAGCGCGGAGCATTCGTGGCACCTGGCCATGTATGCCCTCGTCCTGTCG GAACATGCGGCGGCACCTGTCGACGCCCTGCGCGTGGTGAAGATGCTGCTTATCCACGACATCGTGGAAATCGACGCAGG CGATGTGCCGTTTCACGACCCGGCAGCAAGAGCCGGTCAGGCGGCGCTGGAGGAACAGGCGGCAGAGCGGATCTTCTCGC TGCTGCCGGCCGCCCAGGCAGCGGAGTTCCGGAGTCTGTGGTCCGAGTTCGAAGCGGGAGAAAGCGACGACGCACGGTTT GCGAAATCGCTGGACCGTCTGCAGCCGTTACTCCACAACGCAGCGACCGGAGGTGGTAGCTGGGTGGAGTGCGACGTCAC GGAAGAACAGGCCATGGCACGTTACGGCCCGCCGATCGAGCGCGGCTCGCCAGCGCTTTGGGAAGAAGCGTCGAGGCTTG TCCGCGAGCATTTTCAGAAGCCTCGGGAAGGGTGA
Upstream 100 bases:
>100_bases TGGAAGCCGTGATCGCACTCGGCACGACGCACGGCCTGACGTGCGATGCCCCGATTCAGATGCCGGCCAACAACTTCAGC CTGGTGTTTCGCAAGCAGGC
Downstream 100 bases:
>100_bases CGTGGGTGGGTGTACACCGCGGGTGCCAGGTGTACCTACGCAGGGTGAGGGGCGGTAGCCACACAATGCTGTGAATTCGT GTCGGATTGCGCTTTCGCCG
Product: metal-dependent phosphohydrolase, HD subdomain-containing protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain Protein; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Hydrolase; Hydrolases Of HD Superfamily; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; Xin-Antitoxin System Toxin Component PIN Family; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain-Containing; HDDC2 Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSDGRRTAPRGRGGLLNFTAKHCPSAFNVNLSNLERQLSFLREIDLLKSVVRMTPLINQSRRENSAEHSWHLAMYALVLS EHAAAPVDALRVVKMLLIHDIVEIDAGDVPFHDPAARAGQAALEEQAAERIFSLLPAAQAAEFRSLWSEFEAGESDDARF AKSLDRLQPLLHNAATGGGSWVECDVTEEQAMARYGPPIERGSPALWEEASRLVREHFQKPREG
Sequences:
>Translated_224_residues MSDGRRTAPRGRGGLLNFTAKHCPSAFNVNLSNLERQLSFLREIDLLKSVVRMTPLINQSRRENSAEHSWHLAMYALVLS EHAAAPVDALRVVKMLLIHDIVEIDAGDVPFHDPAARAGQAALEEQAAERIFSLLPAAQAAEFRSLWSEFEAGESDDARF AKSLDRLQPLLHNAATGGGSWVECDVTEEQAMARYGPPIERGSPALWEEASRLVREHFQKPREG >Mature_223_residues SDGRRTAPRGRGGLLNFTAKHCPSAFNVNLSNLERQLSFLREIDLLKSVVRMTPLINQSRRENSAEHSWHLAMYALVLSE HAAAPVDALRVVKMLLIHDIVEIDAGDVPFHDPAARAGQAALEEQAAERIFSLLPAAQAAEFRSLWSEFEAGESDDARFA KSLDRLQPLLHNAATGGGSWVECDVTEEQAMARYGPPIERGSPALWEEASRLVREHFQKPREG
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24846; Mature: 24715
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGRRTAPRGRGGLLNFTAKHCPSAFNVNLSNLERQLSFLREIDLLKSVVRMTPLINQS CCCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRENSAEHSWHLAMYALVLSEHAAAPVDALRVVKMLLIHDIVEIDAGDVPFHDPAARAGQ HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AALEEQAAERIFSLLPAAQAAEFRSLWSEFEAGESDDARFAKSLDRLQPLLHNAATGGGS HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WVECDVTEEQAMARYGPPIERGSPALWEEASRLVREHFQKPREG EEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDGRRTAPRGRGGLLNFTAKHCPSAFNVNLSNLERQLSFLREIDLLKSVVRMTPLINQS CCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRENSAEHSWHLAMYALVLSEHAAAPVDALRVVKMLLIHDIVEIDAGDVPFHDPAARAGQ HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AALEEQAAERIFSLLPAAQAAEFRSLWSEFEAGESDDARFAKSLDRLQPLLHNAATGGGS HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WVECDVTEEQAMARYGPPIERGSPALWEEASRLVREHFQKPREG EEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA