Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 94312733

GI number: 94312733

Start: 343717

End: 344910

Strand: Direct

Name: mmgC [H]

Synonym: Rmet_3803

Alternate gene names: 94312733

Gene position: 343717-344910 (Clockwise)

Preceding gene: 94312730

Following gene: 94312734

Centisome position: 13.32

GC content: 63.32

Gene sequence:

>1194_bases
ATGGACCTGCGTTTCACCAAGGAAGAAGAAGCCTTCCGAGAGGAAGTCCGCGCCTTTGTCCAGGCCAACTTGCCGACCGA
TATTCGCGACAAGGTACTGGGCCACAGGCGTGTGGAAAAGGACGACTACGTGCGGTGGCACCGCATCCTTCACGCGCATG
GTTGGGGCGCCCCCACCTGGCCGAAGGAATGGGGCGGCACGGGCTGGAACGCGCTGCAGCGCCTGATTTTCGAGATCGAG
ACGCTGCGGGCTGGCGCCCCGCGCATGTTGCCGTTCGGTCTCACGATGATTGGCCCGGTGCTGATGAAGTACGCCAGCGC
CGCGCACAAGGAACGTTTCCTGCCGCGCATCCCGACCGTGGATGAGTTCTGGTGTCAGGGTTACTCCGAACCCGGTTCCG
GTTCGGATCTCGCCTCGCTCCGGACCAGCGCCGTGCGCCGTGGCGACAAGTACATCGTCAATGGCCAGAAGACCTGGACG
ACGATGGCGCATTTCGCCGACTGGATCTTCTGCCTGGTGCGTACCGATCCGGAAGCCAAGGCCCAGGAAGGCATCTCGAT
GCTGCTGATCGACATGAAATCGCCCGGTGTGACCGTGCGACCGATCAAGACGCTCGACGGCGGTCACGACGTGAACGAGA
CCTGGTTCGAAGAAGTCGAGGTACCGGTCGAGAACCTGCTCGGCGAGGAGAACAAGGGCTGGACCTACGCCAAGTACCTG
CTTGGCCACGAGCGCACCGGCATCGCCGGCATCGGGCACTGCTACCGCGAACTGCGCCTGCTCCGGAAGTACGCCGCCGA
GACTACCGATGGCCGTGGCGGCCGCCTGATCGACGACGTGCGTATGCGCGACAAGATCGCTCGTCTCGAAATGGATCTGA
TGGCGCTGGAAATGCTGCTGCTGCGCGTGGCCACGCAGGCCGCGGGCACCCCCGGCCCGGAAGCGTCGATCGTCAAGATT
CGTGGCTCGGAGCTGCAGCAGGACATCGCCATGCTCCAGATGGAAGTGGCGGGCCCGAACGGCTGGCCTTACTCGACGGA
CTGGATGGAGCTGGGCGCGCCTCAGCCCGTTAGTGGCGCGGAATGGGCGGCACCGGCTGCCTCGACCTACTACGACATGC
GCAAGACCACGATCTACGGTGGTTCGACCGAGGTTCAGAAGAACATCATCTCCAAGATGATCATCGGTTTCTAG

Upstream 100 bases:

>100_bases
GCTGTGTGCATTTCGCGTTGTCAAAGGCAGGATTCGGCAAACTTGAACCAGCCCGGCCCGGGCGCCCATAGAATCTGTTC
ATCAGACCGGAGACAGATTC

Downstream 100 bases:

>100_bases
GCGAAAGGACGACAAGCATGGATTTCACGTATAGCGAAGAACAGCGGATGCTCGCCGACAGCCTGCGCCGCTTTGTCGAA
TCCGAGTACTCCTTCGAGAA

Product: putative acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MDLRFTKEEEAFREEVRAFVQANLPTDIRDKVLGHRRVEKDDYVRWHRILHAHGWGAPTWPKEWGGTGWNALQRLIFEIE
TLRAGAPRMLPFGLTMIGPVLMKYASAAHKERFLPRIPTVDEFWCQGYSEPGSGSDLASLRTSAVRRGDKYIVNGQKTWT
TMAHFADWIFCLVRTDPEAKAQEGISMLLIDMKSPGVTVRPIKTLDGGHDVNETWFEEVEVPVENLLGEENKGWTYAKYL
LGHERTGIAGIGHCYRELRLLRKYAAETTDGRGGRLIDDVRMRDKIARLEMDLMALEMLLLRVATQAAGTPGPEASIVKI
RGSELQQDIAMLQMEVAGPNGWPYSTDWMELGAPQPVSGAEWAAPAASTYYDMRKTTIYGGSTEVQKNIISKMIIGF

Sequences:

>Translated_397_residues
MDLRFTKEEEAFREEVRAFVQANLPTDIRDKVLGHRRVEKDDYVRWHRILHAHGWGAPTWPKEWGGTGWNALQRLIFEIE
TLRAGAPRMLPFGLTMIGPVLMKYASAAHKERFLPRIPTVDEFWCQGYSEPGSGSDLASLRTSAVRRGDKYIVNGQKTWT
TMAHFADWIFCLVRTDPEAKAQEGISMLLIDMKSPGVTVRPIKTLDGGHDVNETWFEEVEVPVENLLGEENKGWTYAKYL
LGHERTGIAGIGHCYRELRLLRKYAAETTDGRGGRLIDDVRMRDKIARLEMDLMALEMLLLRVATQAAGTPGPEASIVKI
RGSELQQDIAMLQMEVAGPNGWPYSTDWMELGAPQPVSGAEWAAPAASTYYDMRKTTIYGGSTEVQKNIISKMIIGF
>Mature_397_residues
MDLRFTKEEEAFREEVRAFVQANLPTDIRDKVLGHRRVEKDDYVRWHRILHAHGWGAPTWPKEWGGTGWNALQRLIFEIE
TLRAGAPRMLPFGLTMIGPVLMKYASAAHKERFLPRIPTVDEFWCQGYSEPGSGSDLASLRTSAVRRGDKYIVNGQKTWT
TMAHFADWIFCLVRTDPEAKAQEGISMLLIDMKSPGVTVRPIKTLDGGHDVNETWFEEVEVPVENLLGEENKGWTYAKYL
LGHERTGIAGIGHCYRELRLLRKYAAETTDGRGGRLIDDVRMRDKIARLEMDLMALEMLLLRVATQAAGTPGPEASIVKI
RGSELQQDIAMLQMEVAGPNGWPYSTDWMELGAPQPVSGAEWAAPAASTYYDMRKTTIYGGSTEVQKNIISKMIIGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=400, Percent_Identity=27.25, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI226958412, Length=403, Percent_Identity=24.5657568238213, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557233, Length=344, Percent_Identity=28.1976744186047, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI226958414, Length=349, Percent_Identity=25.7879656160458, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI4501857, Length=407, Percent_Identity=25.0614250614251, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI4557231, Length=293, Percent_Identity=26.962457337884, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI187960098, Length=293, Percent_Identity=26.962457337884, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI76496475, Length=280, Percent_Identity=29.2857142857143, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4557235, Length=280, Percent_Identity=29.2857142857143, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI21361497, Length=356, Percent_Identity=24.438202247191, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI7656849, Length=200, Percent_Identity=29, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI48976061, Length=312, Percent_Identity=25.6410256410256, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI211971008, Length=312, Percent_Identity=25.6410256410256, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081958, Length=316, Percent_Identity=25.3164556962025, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786223, Length=354, Percent_Identity=24.0112994350282, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=418, Percent_Identity=26.0765550239234, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17569725, Length=372, Percent_Identity=26.8817204301075, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=371, Percent_Identity=25.0673854447439, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=408, Percent_Identity=25.4901960784314, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=405, Percent_Identity=25.4320987654321, Blast_Score=104, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=235, Percent_Identity=30.6382978723404, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=407, Percent_Identity=25.0614250614251, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=235, Percent_Identity=30.2127659574468, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=256, Percent_Identity=27.34375, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=316, Percent_Identity=25.3164556962025, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=217, Percent_Identity=30.8755760368664, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=354, Percent_Identity=24.8587570621469, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=193, Percent_Identity=29.5336787564767, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=261, Percent_Identity=25.2873563218391, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=331, Percent_Identity=27.7945619335347, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666513, Length=341, Percent_Identity=25.8064516129032, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI21356377, Length=351, Percent_Identity=27.6353276353276, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI21355753, Length=305, Percent_Identity=27.5409836065574, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24660351, Length=311, Percent_Identity=27.6527331189711, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281363737, Length=282, Percent_Identity=27.3049645390071, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24646207, Length=399, Percent_Identity=24.5614035087719, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19920834, Length=355, Percent_Identity=25.6338028169014, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44758; Mature: 44758

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRFTKEEEAFREEVRAFVQANLPTDIRDKVLGHRRVEKDDYVRWHRILHAHGWGAPTW
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
PKEWGGTGWNALQRLIFEIETLRAGAPRMLPFGLTMIGPVLMKYASAAHKERFLPRIPTV
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DEFWCQGYSEPGSGSDLASLRTSAVRRGDKYIVNGQKTWTTMAHFADWIFCLVRTDPEAK
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHEEEEECCCHHH
AQEGISMLLIDMKSPGVTVRPIKTLDGGHDVNETWFEEVEVPVENLLGEENKGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LGHERTGIAGIGHCYRELRLLRKYAAETTDGRGGRLIDDVRMRDKIARLEMDLMALEMLL
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRVATQAAGTPGPEASIVKIRGSELQQDIAMLQMEVAGPNGWPYSTDWMELGAPQPVSGA
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCC
EWAAPAASTYYDMRKTTIYGGSTEVQKNIISKMIIGF
CCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLRFTKEEEAFREEVRAFVQANLPTDIRDKVLGHRRVEKDDYVRWHRILHAHGWGAPTW
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
PKEWGGTGWNALQRLIFEIETLRAGAPRMLPFGLTMIGPVLMKYASAAHKERFLPRIPTV
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DEFWCQGYSEPGSGSDLASLRTSAVRRGDKYIVNGQKTWTTMAHFADWIFCLVRTDPEAK
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHEEEEECCCHHH
AQEGISMLLIDMKSPGVTVRPIKTLDGGHDVNETWFEEVEVPVENLLGEENKGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LGHERTGIAGIGHCYRELRLLRKYAAETTDGRGGRLIDDVRMRDKIARLEMDLMALEMLL
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRVATQAAGTPGPEASIVKIRGSELQQDIAMLQMEVAGPNGWPYSTDWMELGAPQPVSGA
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCC
EWAAPAASTYYDMRKTTIYGGSTEVQKNIISKMIIGF
CCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]