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The map label for this gene is flgF [H]

Identifier: 94312670

GI number: 94312670

Start: 280483

End: 281226

Strand: Direct

Name: flgF [H]

Synonym: Rmet_3738

Alternate gene names: 94312670

Gene position: 280483-281226 (Clockwise)

Preceding gene: 94312669

Following gene: 94312671

Centisome position: 10.87

GC content: 66.8

Gene sequence:

>744_bases
ATGGACCGCATGATCTACACCGCCCTGTCGGGCGCCAAGCAGATACTCGACCAGCAGGCCGCGGTATCGAACAACCTGGC
CAATGCTTCCACAACGGCCTTCAAGGCGCAGGTCAACATGTACCGCGCCGTGCCGGTGGTGGGGCAGGAGACGCAAACAC
GCGCCTTCACGTTGGCCTCGACGCCAGGCGCCGACATGAAAGCCGGTCCGCTCAGTTACACGGGCCGCAACCTGGACGTG
GCGCTGCAGGGCAACGGCTGGCTGGCGGTGCAGATGCCGGACGGCTCCGAGGCATACACCCGAGCGGGATCGCTGCAGGT
GTCGCCGGACGGACAACTCCAGACCTCGCTGGGCCTGCCGGTGATGGGCGACGGCGGTCCGATCGGGATTCCGCCCGGTT
CCACGGTGTCGATCGGCACCGATGGAACCGTGACCGCGCGTGGCCCGGGCGAGGCCGCGAACGGCCTGGCCCAGGTAGGA
AAGCTGCGCGTCGTCACGCCGCCGCCCGAAGGGCTGGCGCGCGGTGACGACGGCTATTTCCGCCTGCGTCCGGGCGTGGA
CCCGCTTCAGCAGGACCCCAACGTCCGCGTAATCTCCGGCGCGCTGGAAGGCAGCAATGTCAACCCGGTCGAGTCCATGG
TGGAAATGATCGCCAACGCGCGTCGCTTCGAAATGCAGATGAAGATGATCACGGGCGCCGACAGCAACGATCAGCGGGCC
AACGCGCTGCTCTCCAACAATTGA

Upstream 100 bases:

>100_bases
AGCGCAACTACCAGGCCAACGCGCAGACCATCAAGGCGCAGGACACGGTCATGCAGACGCTGGTGAACCTCTGATCTCAG
CCTGAACTTCAAGCAGCGTC

Downstream 100 bases:

>100_bases
AGCGCGCGGGCTTGAAGCCAGCGCGGAAAAGCTAAGACAAGGAACACCATGATCCGCTCTCTCTGGATTGCCAAGACCGG
TCTTGATGCGCAGCAGACGC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAVPVVGQETQTRAFTLASTPGADMKAGPLSYTGRNLDV
ALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLPVMGDGGPIGIPPGSTVSIGTDGTVTARGPGEAANGLAQVG
KLRVVTPPPEGLARGDDGYFRLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA
NALLSNN

Sequences:

>Translated_247_residues
MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAVPVVGQETQTRAFTLASTPGADMKAGPLSYTGRNLDV
ALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLPVMGDGGPIGIPPGSTVSIGTDGTVTARGPGEAANGLAQVG
KLRVVTPPPEGLARGDDGYFRLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA
NALLSNN
>Mature_247_residues
MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAVPVVGQETQTRAFTLASTPGADMKAGPLSYTGRNLDV
ALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLPVMGDGGPIGIPPGSTVSIGTDGTVTARGPGEAANGLAQVG
KLRVVTPPPEGLARGDDGYFRLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA
NALLSNN

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=250, Percent_Identity=56, Blast_Score=261, Evalue=2e-71,
Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=33.4586466165414, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25743; Mature: 25743

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAVPVVGQETQTRAFTLAS
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEC
TPGADMKAGPLSYTGRNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLP
CCCCCCCCCCCEECCCCEEEEEECCCEEEEECCCCCHHHHCCCCEEECCCCCEEECCCCE
VMGDGGPIGIPPGSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARGDDGYF
EECCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHCEEEEECCCCCCCCCCCCCEE
RLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA
EECCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHH
NALLSNN
HHEECCC
>Mature Secondary Structure
MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAVPVVGQETQTRAFTLAS
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEC
TPGADMKAGPLSYTGRNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLP
CCCCCCCCCCCEECCCCEEEEEECCCEEEEECCCCCHHHHCCCCEEECCCCCEEECCCCE
VMGDGGPIGIPPGSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARGDDGYF
EECCCCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHCEEEEECCCCCCCCCCCCCEE
RLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA
EECCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHH
NALLSNN
HHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]