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The map label for this gene is tse [H]

Identifier: 94312610

GI number: 94312610

Start: 215393

End: 217210

Strand: Direct

Name: tse [H]

Synonym: Rmet_3678

Alternate gene names: 94312610

Gene position: 215393-217210 (Clockwise)

Preceding gene: 94312608

Following gene: 94312611

Centisome position: 8.35

GC content: 65.29

Gene sequence:

>1818_bases
ATGTCTTTTCACCAGAATATCCAGATCAAGACCCTTTTACGGGGCGCAATGGCCTTGCTTACGGCGAACCTCCTGCTGGT
CGGCGGCGCCGGTCTGCTAGGTATTTCTCAATCCAATGGCGCGCTCAAGGAGACGTACTCCAACCAGTTGGCGTCGTCAC
AGGCGTTGTCCGAGGCGATGCTCGGCACCACCCGCCTGCGCCTGGCGCTCGATCGCGGTGTGATGCGGGGGAGCGAGAAC
GATGATCTGAAGAAGCACGTCGACCGCGCCAATGTCTTCATCGAGTCATCCGACAAGGGTTGGAAGACCTATATGTCGCT
GCCTCAGAACGACGATGAAAAGGCGCTGGCCGGCGAACTGGCGGCCAAGCGGCAGGCGTTCTTCGAGACCGGCGTCAAGC
CACTTGAGCAGGCCATGGTGGCCGGCAACCATGACGAGGCGCTGCGTCTGGCGCGCGATGTGCTGCCAGACCTGCAGCGC
GGCATGTCCGCCGCGCACGAGAAGCTCGAGAAATTCCAGTTCGATACCGGCAAGGCCAACTTCGAAGGCGCGCAGTCGCG
CTATGAGACGACTCGCGCGATGTCGCTGGCGCTGATCGCGCTCGGCATCCTGGTTGCCGTATTCGCTACCGTGATGCTTC
ACCGCGCCATCGTCCGCCCGGTACAGGAAGCGCTCGACGTGTTCGAGCGCATGACGCGCGGCGACCTGACATCGCGTATC
TCCAGCATGTCGAAGAACGAGATCGGTCGCATGATGCAGGCGCTGGCCACCATGCAGGAGAGCATCGCGGGCATCGTCGC
CGAAGTTCGCGGCGGCACCGATTCGATGGCGTCGGCCACGCAGCAGATCTCTGCTGGCAACACGGATCTCTCGCAGCGTA
CCGAGGAACAGGCCGCATCGCTCGAGCAGACCGCGGCCAGCATGGAAGAACTGACCACCGTCGTGCGACAGAATGCCGAC
AACGCGCGCCAGGCCGGCGCTCTGGCCGGCGAGGCTTCGGAAATCGCCATGAAAGGTGGCGACGTGGTCGGCCGCGTGGT
GGACACCATGAACGAGATCAACGGCGCCTCGCGCAAGGTGGTCGACATCATTGGCGTGATCGAGGGCATCGCATTCCAGA
CCAACATCCTGGCGCTGAATGCGGCGGTGGAAGCCGCGCGCGCCGGCGAGCAGGGACGCGGTTTCGCGGTCGTGGCGGGC
GAGGTGCGCAGCCTCGCGCAGCGCAGCGCCAATGCAGCGAAGGAGATCGAGTCGTTGATCAACGAATCCGGCCAGCGCGT
GGAAAGCGGCACCCGGCTTGTTGCTGAAGCGGGTCAGACCATGGGCGAGATCGTTCATGCCGTGCGCCGCGTGACGGACA
TCATGAACGAAATCAGCGCCGCGTCGCAGGAGCAGACCACCGGCATCGAGCAGGTCAACCAGGCCGTGGCGCAGATGGAC
CAGGTCACGCAGCAGAACGCGGCTCTGGTGGAAGAAGCGGCGGCAGCGGCCGGTGCGCTGGAAGAGCAGGCACAAAAGCT
CAAGGGTGTGGTGTCGGTGTTCACGCTGGTTTCCGATGGCGGCAACGCGCGCGCCAATGCCGGCGCGCAGCGTGCCGTGC
ATTCGCTGGCGACGTCGCCGACAAGCGCACCAGCAACTGCACCGGCAAGCGCACCGGCAATGGCACGCAGCGCCGAACGC
GCGTCGCCGCCCGCAATGCTCCCGCCCAACCGCCGTTCGCCCGTGGCGCGCATGTCAGCCGAAAGCCGGCCATTGCGCCC
GTCGGCGAGCCAGCCGGCCGCGGCAGCCACGGCCGACGACGACTGGGCAACCTTCTGA

Upstream 100 bases:

>100_bases
GATGGCCGTTATCGAAGCCTGAGCGGGGCGACGCGCGGTATCGCTCCGCCGGGACCGGAGCAGGGGTGTCTTCGGGTTAT
CCCCCAATGATCAGCACATC

Downstream 100 bases:

>100_bases
TCAACGCGGTCAACCAGCAAGGACACATCGACGCTAGATTTACGAGGCATTTGCGAAGTGCCATGATGCGGGGCGCGCGC
CAGGCACGCATCATGGCGCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MSFHQNIQIKTLLRGAMALLTANLLLVGGAGLLGISQSNGALKETYSNQLASSQALSEAMLGTTRLRLALDRGVMRGSEN
DDLKKHVDRANVFIESSDKGWKTYMSLPQNDDEKALAGELAAKRQAFFETGVKPLEQAMVAGNHDEALRLARDVLPDLQR
GMSAAHEKLEKFQFDTGKANFEGAQSRYETTRAMSLALIALGILVAVFATVMLHRAIVRPVQEALDVFERMTRGDLTSRI
SSMSKNEIGRMMQALATMQESIAGIVAEVRGGTDSMASATQQISAGNTDLSQRTEEQAASLEQTAASMEELTTVVRQNAD
NARQAGALAGEASEIAMKGGDVVGRVVDTMNEINGASRKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSANAAKEIESLINESGQRVESGTRLVAEAGQTMGEIVHAVRRVTDIMNEISAASQEQTTGIEQVNQAVAQMD
QVTQQNAALVEEAAAAAGALEEQAQKLKGVVSVFTLVSDGGNARANAGAQRAVHSLATSPTSAPATAPASAPAMARSAER
ASPPAMLPPNRRSPVARMSAESRPLRPSASQPAAAATADDDWATF

Sequences:

>Translated_605_residues
MSFHQNIQIKTLLRGAMALLTANLLLVGGAGLLGISQSNGALKETYSNQLASSQALSEAMLGTTRLRLALDRGVMRGSEN
DDLKKHVDRANVFIESSDKGWKTYMSLPQNDDEKALAGELAAKRQAFFETGVKPLEQAMVAGNHDEALRLARDVLPDLQR
GMSAAHEKLEKFQFDTGKANFEGAQSRYETTRAMSLALIALGILVAVFATVMLHRAIVRPVQEALDVFERMTRGDLTSRI
SSMSKNEIGRMMQALATMQESIAGIVAEVRGGTDSMASATQQISAGNTDLSQRTEEQAASLEQTAASMEELTTVVRQNAD
NARQAGALAGEASEIAMKGGDVVGRVVDTMNEINGASRKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSANAAKEIESLINESGQRVESGTRLVAEAGQTMGEIVHAVRRVTDIMNEISAASQEQTTGIEQVNQAVAQMD
QVTQQNAALVEEAAAAAGALEEQAQKLKGVVSVFTLVSDGGNARANAGAQRAVHSLATSPTSAPATAPASAPAMARSAER
ASPPAMLPPNRRSPVARMSAESRPLRPSASQPAAAATADDDWATF
>Mature_604_residues
SFHQNIQIKTLLRGAMALLTANLLLVGGAGLLGISQSNGALKETYSNQLASSQALSEAMLGTTRLRLALDRGVMRGSEND
DLKKHVDRANVFIESSDKGWKTYMSLPQNDDEKALAGELAAKRQAFFETGVKPLEQAMVAGNHDEALRLARDVLPDLQRG
MSAAHEKLEKFQFDTGKANFEGAQSRYETTRAMSLALIALGILVAVFATVMLHRAIVRPVQEALDVFERMTRGDLTSRIS
SMSKNEIGRMMQALATMQESIAGIVAEVRGGTDSMASATQQISAGNTDLSQRTEEQAASLEQTAASMEELTTVVRQNADN
ARQAGALAGEASEIAMKGGDVVGRVVDTMNEINGASRKVVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRSLAQRSANAAKEIESLINESGQRVESGTRLVAEAGQTMGEIVHAVRRVTDIMNEISAASQEQTTGIEQVNQAVAQMDQ
VTQQNAALVEEAAAAAGALEEQAQKLKGVVSVFTLVSDGGNARANAGAQRAVHSLATSPTSAPATAPASAPAMARSAERA
SPPAMLPPNRRSPVARMSAESRPLRPSASQPAAAATADDDWATF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=453, Percent_Identity=46.7991169977925, Blast_Score=336, Evalue=3e-93,
Organism=Escherichia coli, GI1788194, Length=446, Percent_Identity=46.1883408071749, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI2367378, Length=436, Percent_Identity=46.5596330275229, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=57.8947368421053, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1789453, Length=314, Percent_Identity=37.2611464968153, Blast_Score=205, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 63846; Mature: 63715

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFHQNIQIKTLLRGAMALLTANLLLVGGAGLLGISQSNGALKETYSNQLASSQALSEAM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LGTTRLRLALDRGVMRGSENDDLKKHVDRANVFIESSDKGWKTYMSLPQNDDEKALAGEL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHH
AAKRQAFFETGVKPLEQAMVAGNHDEALRLARDVLPDLQRGMSAAHEKLEKFQFDTGKAN
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEGAQSRYETTRAMSLALIALGILVAVFATVMLHRAIVRPVQEALDVFERMTRGDLTSRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMSKNEIGRMMQALATMQESIAGIVAEVRGGTDSMASATQQISAGNTDLSQRTEEQAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEQTAASMEELTTVVRQNADNARQAGALAGEASEIAMKGGDVVGRVVDTMNEINGASRKV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
VDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSANAAKEIESLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
NESGQRVESGTRLVAEAGQTMGEIVHAVRRVTDIMNEISAASQEQTTGIEQVNQAVAQMD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVTQQNAALVEEAAAAAGALEEQAQKLKGVVSVFTLVSDGGNARANAGAQRAVHSLATSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
TSAPATAPASAPAMARSAERASPPAMLPPNRRSPVARMSAESRPLRPSASQPAAAATADD
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
DWATF
CCCCC
>Mature Secondary Structure 
SFHQNIQIKTLLRGAMALLTANLLLVGGAGLLGISQSNGALKETYSNQLASSQALSEAM
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LGTTRLRLALDRGVMRGSENDDLKKHVDRANVFIESSDKGWKTYMSLPQNDDEKALAGEL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHH
AAKRQAFFETGVKPLEQAMVAGNHDEALRLARDVLPDLQRGMSAAHEKLEKFQFDTGKAN
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEGAQSRYETTRAMSLALIALGILVAVFATVMLHRAIVRPVQEALDVFERMTRGDLTSRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMSKNEIGRMMQALATMQESIAGIVAEVRGGTDSMASATQQISAGNTDLSQRTEEQAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEQTAASMEELTTVVRQNADNARQAGALAGEASEIAMKGGDVVGRVVDTMNEINGASRKV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
VDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSANAAKEIESLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
NESGQRVESGTRLVAEAGQTMGEIVHAVRRVTDIMNEISAASQEQTTGIEQVNQAVAQMD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVTQQNAALVEEAAAAAGALEEQAQKLKGVVSVFTLVSDGGNARANAGAQRAVHSLATSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
TSAPATAPASAPAMARSAERASPPAMLPPNRRSPVARMSAESRPLRPSASQPAAAATADD
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
DWATF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]